| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is yfbT [C]
Identifier: 55981792
GI number: 55981792
Start: 1706239
End: 1706865
Strand: Direct
Name: yfbT [C]
Synonym: TTHA1823
Alternate gene names: 55981792
Gene position: 1706239-1706865 (Clockwise)
Preceding gene: 55981791
Following gene: 55981795
Centisome position: 92.24
GC content: 69.54
Gene sequence:
>627_bases GTGCTTAAGGCGGTCCTCTTTGACCTGGACGGCACCCTGGCCGACACCGACCCCCTGCACCTCCTCGCCTGGCGGGAGGT CCTGGCGCCCTACGGCCTCAAGGTGGACCCCGCCTTCTACCGGGAAAGGATCTCGGGGAGGCTGAACCCGGAGATCGTCC GCGACCTCCTGGGCCTGGAGGGCAAGGAGGCGGAAAGGCTCATCGCGGCCAAGGAGGCCCGCTTCCGGGCCCTCGCCCAG GGGCTAAGGCCCACCCCGGGGCTTCCGGAATTTTTGGAGCGAATCAGGGAAAAGGGGCTCCTCTGGGGCGTGGTGACCAA CGCCCCCAAGGAAAACGCCCGCCACGTCCTCGAGGCCCTGGGCCTGAGGCCGCCCCTCCTGGTCCTGGCGGAGGAGGTGG GCCGGGGGAAGCCCGACCCCCTTCCCTACCAACTGGCCCTAAGGCGCCTCGGGGTGGCCCCCGAGGAAGCCCTGGCCTTT GAGGACTCCCCTTCCGGGGTGAGAAGCGCCGTGGGGGCGGGGATCCCCACCTACGGCCTCCTCACGGGGCATAAGGGGGA GGCTCTTTTGCAGGCGGGAGCCAAGGGGGTGTTCCGGGACTTCCGGGAAGCCCTAGGCCTCCTTTAG
Upstream 100 bases:
>100_bases CTTTTCGCCCTCCTGCCCGACCGGGGGATCCCCTTGGGGCTCTTCGCCCTAAGCCTCGCCCTCTACCTCCTCCTCCGGGG CGCGGAGCGGGAGGTGGTCC
Downstream 100 bases:
>100_bases GGCGTACCGGGCGAAGGCCTCCTCGTCAAAGCGGGCCTCCACCAGGTCCTCCCAGTAGAGCCACCCCTCGCGGAAGGGGG GAAAGGGGAAGAAGCCGCCC
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLKAVLFDLDGTLADTDPLHLLAWREVLAPYGLKVDPAFYRERISGRLNPEIVRDLLGLEGKEAERLIAAKEARFRALAQ GLRPTPGLPEFLERIREKGLLWGVVTNAPKENARHVLEALGLRPPLLVLAEEVGRGKPDPLPYQLALRRLGVAPEEALAF EDSPSGVRSAVGAGIPTYGLLTGHKGEALLQAGAKGVFRDFREALGLL
Sequences:
>Translated_208_residues MLKAVLFDLDGTLADTDPLHLLAWREVLAPYGLKVDPAFYRERISGRLNPEIVRDLLGLEGKEAERLIAAKEARFRALAQ GLRPTPGLPEFLERIREKGLLWGVVTNAPKENARHVLEALGLRPPLLVLAEEVGRGKPDPLPYQLALRRLGVAPEEALAF EDSPSGVRSAVGAGIPTYGLLTGHKGEALLQAGAKGVFRDFREALGLL >Mature_208_residues MLKAVLFDLDGTLADTDPLHLLAWREVLAPYGLKVDPAFYRERISGRLNPEIVRDLLGLEGKEAERLIAAKEARFRALAQ GLRPTPGLPEFLERIREKGLLWGVVTNAPKENARHVLEALGLRPPLLVLAEEVGRGKPDPLPYQLALRRLGVAPEEALAF EDSPSGVRSAVGAGIPTYGLLTGHKGEALLQAGAKGVFRDFREALGLL
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=180, Percent_Identity=34.4444444444444, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787576, Length=201, Percent_Identity=29.3532338308458, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1789046, Length=176, Percent_Identity=31.25, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1790151, Length=186, Percent_Identity=28.494623655914, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789787, Length=235, Percent_Identity=27.2340425531915, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22649; Mature: 22649
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAVLFDLDGTLADTDPLHLLAWREVLAPYGLKVDPAFYRERISGRLNPEIVRDLLGLE CCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC GKEAERLIAAKEARFRALAQGLRPTPGLPEFLERIREKGLLWGVVTNAPKENARHVLEAL CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH GLRPPLLVLAEEVGRGKPDPLPYQLALRRLGVAPEEALAFEDSPSGVRSAVGAGIPTYGL CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCHHE LTGHKGEALLQAGAKGVFRDFREALGLL EECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKAVLFDLDGTLADTDPLHLLAWREVLAPYGLKVDPAFYRERISGRLNPEIVRDLLGLE CCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC GKEAERLIAAKEARFRALAQGLRPTPGLPEFLERIREKGLLWGVVTNAPKENARHVLEAL CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH GLRPPLLVLAEEVGRGKPDPLPYQLALRRLGVAPEEALAFEDSPSGVRSAVGAGIPTYGL CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCHHE LTGHKGEALLQAGAKGVFRDFREALGLL EECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]