| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981791
Identifier: 55981791
GI number: 55981791
Start: 1705197
End: 1706246
Strand: Direct
Name: 55981791
Synonym: TTHA1822
Alternate gene names: NA
Gene position: 1705197-1706246 (Clockwise)
Preceding gene: 55981775
Following gene: 55981792
Centisome position: 92.19
GC content: 71.43
Gene sequence:
>1050_bases ATGCGGTCCGTGCGCTTTCTCGCCGGCTCCTTCCTCGCCCTCTTCCTCGTGGGGGTGATCGTGGCCCTCCCCGGGGCGGC CCTGCCCTACTGGCGGGAGCGGTACGGGACGGAAGAGGGGGCCTCCCTCTACTTCGCCGCCCTCCTCCTCGGCCTCCTCC TCGGGGTGCGCCTGGGGCAGCAGGAGAGGCGCCACCCCCTCCTTCCCCTGGCCCTGGGCCTGGTGGGCCTCGCCTTCCTC GGCCTTCCTTTCGCGCCCTCCTACGCCTGGATGGCGCTCCTGGCCTTCCTCCTCGGCCTGGGGGAGGGGGTGATGAACGT CCACGGGAACAGCCTCGTGGGGGAGCTTTACCCGGAAAGGCGGGTGGAGCTTTTGAACCGGGTCAACGTGGCCTTCGGCC TGGGGGCGGTCCTCACCCCCTTGGCCTTGGGCTCGCTCCCCTACGCCGCCTTTCTGGCCCTGGCGGGCCTTCTCGCCTTC GTCACAAGCGCCCTCGTCCTCGGGGCGCCTCCGGCGGAAAAGCCTAAGGAAAGGCCCCGGGGGGCCCTCTGGCCCTTCCT CCTCGCCGTGGGGCTCTACACGGGCCTCGAGGGGGCCCTGGCCACCTGGAACCGGGTCTGGCTGGAGGCCCTGGGCCACG CCACGGCCCTAGGCGGCCTCCTCCTCACCCTCTACTGGCTCTTCCTCGCCTTGGGCAGGCTCCTCCTCGCAGGAAGAGTG GCCAAGGACCCCTTGAGGGCCCTCCGGGGGCTTCTCCTCGGGGTGATGGGCCTCCTCCTCTTAAACTTCCTCCCCCAGAC CGCCCTCCTCTTCCCCCTCGCGGGCTTCCTCCTCGGCCCCCTCTTCTCCACCCTCTTCGCCCTGGTCCAGGCCCGCTTCG GCCACCGGGCCCTGGGCGGGCTCATGTACGCCGGGGCGGCGGGGAGCACCCTGATCCCCGGGCTTTTCGCCCTCCTGCCC GACCGGGGGATCCCCTTGGGGCTCTTCGCCCTAAGCCTCGCCCTCTACCTCCTCCTCCGGGGCGCGGAGCGGGAGGTGGT CCGTGCTTAA
Upstream 100 bases:
>100_bases GCACCCCGGGGAAGGCGAAGAAGCCTTCGCCGGAAAGGGCTTGGGCCAAAAGCCGCTCCATCCTCCCCATTATTGACCAA AGGGTCACCCAGGGGAGAGA
Downstream 100 bases:
>100_bases GGCGGTCCTCTTTGACCTGGACGGCACCCTGGCCGACACCGACCCCCTGCACCTCCTCGCCTGGCGGGAGGTCCTGGCGC CCTACGGCCTCAAGGTGGAC
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRSVRFLAGSFLALFLVGVIVALPGAALPYWRERYGTEEGASLYFAALLLGLLLGVRLGQQERRHPLLPLALGLVGLAFL GLPFAPSYAWMALLAFLLGLGEGVMNVHGNSLVGELYPERRVELLNRVNVAFGLGAVLTPLALGSLPYAAFLALAGLLAF VTSALVLGAPPAEKPKERPRGALWPFLLAVGLYTGLEGALATWNRVWLEALGHATALGGLLLTLYWLFLALGRLLLAGRV AKDPLRALRGLLLGVMGLLLLNFLPQTALLFPLAGFLLGPLFSTLFALVQARFGHRALGGLMYAGAAGSTLIPGLFALLP DRGIPLGLFALSLALYLLLRGAEREVVRA
Sequences:
>Translated_349_residues MRSVRFLAGSFLALFLVGVIVALPGAALPYWRERYGTEEGASLYFAALLLGLLLGVRLGQQERRHPLLPLALGLVGLAFL GLPFAPSYAWMALLAFLLGLGEGVMNVHGNSLVGELYPERRVELLNRVNVAFGLGAVLTPLALGSLPYAAFLALAGLLAF VTSALVLGAPPAEKPKERPRGALWPFLLAVGLYTGLEGALATWNRVWLEALGHATALGGLLLTLYWLFLALGRLLLAGRV AKDPLRALRGLLLGVMGLLLLNFLPQTALLFPLAGFLLGPLFSTLFALVQARFGHRALGGLMYAGAAGSTLIPGLFALLP DRGIPLGLFALSLALYLLLRGAEREVVRA >Mature_349_residues MRSVRFLAGSFLALFLVGVIVALPGAALPYWRERYGTEEGASLYFAALLLGLLLGVRLGQQERRHPLLPLALGLVGLAFL GLPFAPSYAWMALLAFLLGLGEGVMNVHGNSLVGELYPERRVELLNRVNVAFGLGAVLTPLALGSLPYAAFLALAGLLAF VTSALVLGAPPAEKPKERPRGALWPFLLAVGLYTGLEGALATWNRVWLEALGHATALGGLLLTLYWLFLALGRLLLAGRV AKDPLRALRGLLLGVMGLLLLNFLPQTALLFPLAGFLLGPLFSTLFALVQARFGHRALGGLMYAGAAGSTLIPGLFALLP DRGIPLGLFALSLALYLLLRGAEREVVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37086; Mature: 37086
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVRFLAGSFLALFLVGVIVALPGAALPYWRERYGTEEGASLYFAALLLGLLLGVRLGQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC QERRHPLLPLALGLVGLAFLGLPFAPSYAWMALLAFLLGLGEGVMNVHGNSLVGELYPER HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCHHH RVELLNRVNVAFGLGAVLTPLALGSLPYAAFLALAGLLAFVTSALVLGAPPAEKPKERPR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GALWPFLLAVGLYTGLEGALATWNRVWLEALGHATALGGLLLTLYWLFLALGRLLLAGRV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKDPLRALRGLLLGVMGLLLLNFLPQTALLFPLAGFLLGPLFSTLFALVQARFGHRALGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMYAGAAGSTLIPGLFALLPDRGIPLGLFALSLALYLLLRGAEREVVRA HHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MRSVRFLAGSFLALFLVGVIVALPGAALPYWRERYGTEEGASLYFAALLLGLLLGVRLGQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC QERRHPLLPLALGLVGLAFLGLPFAPSYAWMALLAFLLGLGEGVMNVHGNSLVGELYPER HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCHHH RVELLNRVNVAFGLGAVLTPLALGSLPYAAFLALAGLLAFVTSALVLGAPPAEKPKERPR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GALWPFLLAVGLYTGLEGALATWNRVWLEALGHATALGGLLLTLYWLFLALGRLLLAGRV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKDPLRALRGLLLGVMGLLLLNFLPQTALLFPLAGFLLGPLFSTLFALVQARFGHRALGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMYAGAAGSTLIPGLFALLPDRGIPLGLFALSLALYLLLRGAEREVVRA HHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA