Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981757

Identifier: 55981757

GI number: 55981757

Start: 1673258

End: 1673587

Strand: Reverse

Name: 55981757

Synonym: TTHA1788

Alternate gene names: NA

Gene position: 1673587-1673258 (Counterclockwise)

Preceding gene: 55981758

Following gene: 55981753

Centisome position: 90.48

GC content: 69.39

Gene sequence:

>330_bases
ATGCGGGTCGCCATTGCCTTAGCCAAGGACGACGCCACCCGGGTCTACCCCGGCCCCTTCGGCCACGCTCCCCGGTACGC
CATCTACGAGGCCGGGCCCTCCGGGGAGCTCGTCCTTCTGGAGATCCGGGAAAACCCCTACGCCAAGGCCCACGGGGAGG
AGAAGCACGCCAAGATGCGAGAGCTTCTCCGGGACGTGGACCTCAAGGTGGGGGCCCGCTTCGGCCACAAGGGGTCTTTG
GGGGCCTTCCCCCTGGCCGACCGGGTGGAGGTGGGGCCGGTCTCCCTGGAGGAGGCCCTGGCCCGCCTTAAGGAGCGAAG
TAGCGCCTGA

Upstream 100 bases:

>100_bases
CTCGTCATCTCCCAGGTGCGCCTCCTCCACAAGGCAGGGGGAAAGAGCGGGGAGTGGCGTAGGGAGCAGTAGGCCTACCC
CGGGGGTGTACGCTGAGTAC

Downstream 100 bases:

>100_bases
GGAGCTCCCGGGCCTCGGGGGGCAGGGGGGTCTTCTCCAGGTAGACCTCCACCCCCCGGCGCACCGCCTCCGGGGGCTGG
CCTGCGGGCCAGGGGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMRELLRDVDLKVGARFGHKGSL
GAFPLADRVEVGPVSLEEALARLKERSSA

Sequences:

>Translated_109_residues
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMRELLRDVDLKVGARFGHKGSL
GAFPLADRVEVGPVSLEEALARLKERSSA
>Mature_109_residues
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMRELLRDVDLKVGARFGHKGSL
GAFPLADRVEVGPVSLEEALARLKERSSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11907; Mature: 11907

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMR
CEEEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH
ELLRDVDLKVGARFGHKGSLGAFPLADRVEVGPVSLEEALARLKERSSA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMR
CEEEEEEECCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH
ELLRDVDLKVGARFGHKGSLGAFPLADRVEVGPVSLEEALARLKERSSA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA