| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981734
Identifier: 55981734
GI number: 55981734
Start: 1653647
End: 1654285
Strand: Reverse
Name: 55981734
Synonym: TTHA1765
Alternate gene names: NA
Gene position: 1654285-1653647 (Counterclockwise)
Preceding gene: 55981735
Following gene: 55981733
Centisome position: 89.43
GC content: 67.76
Gene sequence:
>639_bases ATGAGACGGAGAAACCGTTGGCTCAAGACCCTCTTCTGGGGGTCGGTGTTGGGGGTCTTCCTCGCCTTGGTCCTGGTCTT CTCCGGGGTGGCGGTGGGGGCTTTGGAGCAGCGGGAGGGGCGGCCCGTGCCCCAGCCCGTCCCCTTCAGCCACGCCTTCC ACGCCGGGGGTCTCGGCCTTTCCTGCCGCTACTGTCATTCCGCCGTGGAGTACGCCCCCTACGCCGGGCTTCCCCCCACG GAGACCTGCATGACCTGCCACCTCTACGTGAAGCCGGATAGCCCCAACCTGGCCCTCGTGCGGGAGAGCTGGGAGAAAGG GGAGCCCCTCCGCTGGAACCGGGTGGTCAACCTCCCCGACTTCGTCTACTTCCACCACGCCCCTCACGTGGCCAAGGGGG TGGGGTGCGCCGAGTGCCACGGCCGGGTGGACCAGATGCCCGTGGTCTACCAGCCCAAGGCCTTCACCATGAAGTTCTGC CTGGACTGCCACCGGAACCCCGCACCGCGCCTGAGGCCCCGGGAGCAGGTCTTCAACATGGCCTACGTTCCGGACCCCGA GTTGGGACGGGAGCTCCTCAAGCTCTACCACGTCCGGCCCCCCGAGGAGCTCACGAGCTGCAACATCTGCCACCGCTAG
Upstream 100 bases:
>100_bases TTTTCGTATAGGGACAAATGTCCCGAGGCCCCTGGTGTAGTGTACCCCTGAGCAAGCCCTAGGAGCGGGTATCTGGTGGA CCTCTTTGCCGGGGTGGCCT
Downstream 100 bases:
>100_bases GGAGGAGGTATGCGCAGAGGACCCCAGGAGGCGTTGGAGCGAGGGCTTTTCCGGGAGGAGTTTCCCTTCGGTCCCGTGAC CCGGAGGGGGTTTCTGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Class I; Cytochrome C Domain-Containing Protein; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Multiheme Cytochrome Domain Protein; Lipoprotein Cytochrome C
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRRRNRWLKTLFWGSVLGVFLALVLVFSGVAVGALEQREGRPVPQPVPFSHAFHAGGLGLSCRYCHSAVEYAPYAGLPPT ETCMTCHLYVKPDSPNLALVRESWEKGEPLRWNRVVNLPDFVYFHHAPHVAKGVGCAECHGRVDQMPVVYQPKAFTMKFC LDCHRNPAPRLRPREQVFNMAYVPDPELGRELLKLYHVRPPEELTSCNICHR
Sequences:
>Translated_212_residues MRRRNRWLKTLFWGSVLGVFLALVLVFSGVAVGALEQREGRPVPQPVPFSHAFHAGGLGLSCRYCHSAVEYAPYAGLPPT ETCMTCHLYVKPDSPNLALVRESWEKGEPLRWNRVVNLPDFVYFHHAPHVAKGVGCAECHGRVDQMPVVYQPKAFTMKFC LDCHRNPAPRLRPREQVFNMAYVPDPELGRELLKLYHVRPPEELTSCNICHR >Mature_212_residues MRRRNRWLKTLFWGSVLGVFLALVLVFSGVAVGALEQREGRPVPQPVPFSHAFHAGGLGLSCRYCHSAVEYAPYAGLPPT ETCMTCHLYVKPDSPNLALVRESWEKGEPLRWNRVVNLPDFVYFHHAPHVAKGVGCAECHGRVDQMPVVYQPKAFTMKFC LDCHRNPAPRLRPREQVFNMAYVPDPELGRELLKLYHVRPPEELTSCNICHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24129; Mature: 24129
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRNRWLKTLFWGSVLGVFLALVLVFSGVAVGALEQREGRPVPQPVPFSHAFHAGGLGL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SCRYCHSAVEYAPYAGLPPTETCMTCHLYVKPDSPNLALVRESWEKGEPLRWNRVVNLPD CHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCC FVYFHHAPHVAKGVGCAECHGRVDQMPVVYQPKAFTMKFCLDCHRNPAPRLRPREQVFNM EEEEECCCHHHHCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHCC AYVPDPELGRELLKLYHVRPPEELTSCNICHR CCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MRRRNRWLKTLFWGSVLGVFLALVLVFSGVAVGALEQREGRPVPQPVPFSHAFHAGGLGL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SCRYCHSAVEYAPYAGLPPTETCMTCHLYVKPDSPNLALVRESWEKGEPLRWNRVVNLPD CHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCC FVYFHHAPHVAKGVGCAECHGRVDQMPVVYQPKAFTMKFCLDCHRNPAPRLRPREQVFNM EEEEECCCHHHHCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHCC AYVPDPELGRELLKLYHVRPPEELTSCNICHR CCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA