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The map label for this gene is lysK [H]

Identifier: 55981726

GI number: 55981726

Start: 1645004

End: 1646089

Strand: Direct

Name: lysK [H]

Synonym: TTHA1757

Alternate gene names: 55981726

Gene position: 1645004-1646089 (Clockwise)

Preceding gene: 55981725

Following gene: 55981727

Centisome position: 88.93

GC content: 68.42

Gene sequence:

>1086_bases
ATGAGCAAAAGCGCCTTGGATCCCGTTGAGTTCCTCAAGGGGGCCCTGGAGATCCCCTCCCCTTCCGGAAAGGAGCGGGC
GGTGGCCGAGTACCTGGCGGAGGGGATGCAAAAGCTGGGCCTCAAGGGCTTCGTGGACGAGGCGGACAACGCCCGGGGCC
AGGTGGGGGAAGGGCCCGTCCAGGTGGTCCTCCTGGGGCACATTGACACCGTGCCCGGCCAGATCCCCGTGCGCCTGGAA
GGGGGCAGGCTCTTCGGCCGGGGAGCGGTGGACGCCAAGGGGCCTTTCGTGGCCATGATCTTCGCCGCGGCGGGGCTTTC
CGAGGAGGCCAGGAGGCGCCTCACCGTCCACCTGGTTGGGGCCACGGAGGAGGAGGCCCCAAGCTCCAAGGGAGCAAGGT
TCGTGGCCCCCCGCCTCAAGCCCCACTACGCGGTGATCGGGGAGCCCTCGGGCTGGGAGGGGATCACCCTGGGGTACAAG
GGGAGGCTTTTGGTGAAGGCCCGGCGGGAGAAGGACCACTTCCACTCGGCCCACCACGAGCCCAACGCCGCCGAGGAGCT
CATCAGCTACTTCGTGGCCATCAAGGCCTGGGCCGAGGCCATGAACGTGGGCCAGCGTCCCTTTGACCAGGTGCAGTACA
CCCTCCGCGACTTCAGGGTCCACCCCGCGGAGCTCAGACAGGTGGCGGAGATGTTCTTTGACCTAAGGCTCCCTCCAAGG
CTTCCCCCCGAGGAGGCCATCCGCCACCTCACGGCCTACGCCCCCCCCACGATTGAGCTGGAGTTCTTCGGCCGCGAGGT
CCCCTACCAGGGGCCCAAGGACACCCCCCTCACCCGGGCCTTCCGCCAGGCCATCCGCAAGGCGGGGGGAAGGCCCGTCT
TCAAGCTGAAGACGGGAACGAGCGACATGAACGTCCTGGCCCCCCACTGGCCGGTGCCCATGGTGGCCTACGGCCCCGGG
GACTCCACCCTGGACCACACCCCCTACGAGCACGTGGAGGTGGCGGAGTTTCTCAAAGGGATTGAGGTGCTGAGGGGGGC
CCTCGAGGCCCTGGCGCAAACGCACGCGGGGGAGAAGGAGGGGTAG

Upstream 100 bases:

>100_bases
CCCCGACGGCCGGGTCACCACGGTGCCCGCGCACCCGGGGGAGACCCTAAGGCCGGGAACCCTCCTCGCCATTCTCAAGT
GGGCTGGAGCAAGGAAACCT

Downstream 100 bases:

>100_bases
GCTAAGCTAAACGCGTGGTCCTCCCCTGGCTGGCCCTGCCCCTCGGGGGGCTTTTCCTCCTGCCCGCGGTGTTGGCCAAG
GACCCGGTGCCCTTCGCCCT

Product: acetyl-lysine deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSKSALDPVEFLKGALEIPSPSGKERAVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPVQVVLLGHIDTVPGQIPVRLE
GGRLFGRGAVDAKGPFVAMIFAAAGLSEEARRRLTVHLVGATEEEAPSSKGARFVAPRLKPHYAVIGEPSGWEGITLGYK
GRLLVKARREKDHFHSAHHEPNAAEELISYFVAIKAWAEAMNVGQRPFDQVQYTLRDFRVHPAELRQVAEMFFDLRLPPR
LPPEEAIRHLTAYAPPTIELEFFGREVPYQGPKDTPLTRAFRQAIRKAGGRPVFKLKTGTSDMNVLAPHWPVPMVAYGPG
DSTLDHTPYEHVEVAEFLKGIEVLRGALEALAQTHAGEKEG

Sequences:

>Translated_361_residues
MSKSALDPVEFLKGALEIPSPSGKERAVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPVQVVLLGHIDTVPGQIPVRLE
GGRLFGRGAVDAKGPFVAMIFAAAGLSEEARRRLTVHLVGATEEEAPSSKGARFVAPRLKPHYAVIGEPSGWEGITLGYK
GRLLVKARREKDHFHSAHHEPNAAEELISYFVAIKAWAEAMNVGQRPFDQVQYTLRDFRVHPAELRQVAEMFFDLRLPPR
LPPEEAIRHLTAYAPPTIELEFFGREVPYQGPKDTPLTRAFRQAIRKAGGRPVFKLKTGTSDMNVLAPHWPVPMVAYGPG
DSTLDHTPYEHVEVAEFLKGIEVLRGALEALAQTHAGEKEG
>Mature_360_residues
SKSALDPVEFLKGALEIPSPSGKERAVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPVQVVLLGHIDTVPGQIPVRLEG
GRLFGRGAVDAKGPFVAMIFAAAGLSEEARRRLTVHLVGATEEEAPSSKGARFVAPRLKPHYAVIGEPSGWEGITLGYKG
RLLVKARREKDHFHSAHHEPNAAEELISYFVAIKAWAEAMNVGQRPFDQVQYTLRDFRVHPAELRQVAEMFFDLRLPPRL
PPEEAIRHLTAYAPPTIELEFFGREVPYQGPKDTPLTRAFRQAIRKAGGRPVFKLKTGTSDMNVLAPHWPVPMVAYGPGD
STLDHTPYEHVEVAEFLKGIEVLRGALEALAQTHAGEKEG

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family. LysK subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010175
- InterPro:   IPR002933 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.1.-

Molecular weight: Translated: 39595; Mature: 39464

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSALDPVEFLKGALEIPSPSGKERAVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPV
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
QVVLLGHIDTVPGQIPVRLEGGRLFGRGAVDAKGPFVAMIFAAAGLSEEARRRLTVHLVG
EEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCHHHHCEEEEEEEE
ATEEEAPSSKGARFVAPRLKPHYAVIGEPSGWEGITLGYKGRLLVKARREKDHFHSAHHE
CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHCCCC
PNAAEELISYFVAIKAWAEAMNVGQRPFDQVQYTLRDFRVHPAELRQVAEMFFDLRLPPR
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
LPPEEAIRHLTAYAPPTIELEFFGREVPYQGPKDTPLTRAFRQAIRKAGGRPVFKLKTGT
CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
SDMNVLAPHWPVPMVAYGPGDSTLDHTPYEHVEVAEFLKGIEVLRGALEALAQTHAGEKE
CCCCEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
G
C
>Mature Secondary Structure 
SKSALDPVEFLKGALEIPSPSGKERAVAEYLAEGMQKLGLKGFVDEADNARGQVGEGPV
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
QVVLLGHIDTVPGQIPVRLEGGRLFGRGAVDAKGPFVAMIFAAAGLSEEARRRLTVHLVG
EEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCHHHHCEEEEEEEE
ATEEEAPSSKGARFVAPRLKPHYAVIGEPSGWEGITLGYKGRLLVKARREKDHFHSAHHE
CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHCCCC
PNAAEELISYFVAIKAWAEAMNVGQRPFDQVQYTLRDFRVHPAELRQVAEMFFDLRLPPR
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
LPPEEAIRHLTAYAPPTIELEFFGREVPYQGPKDTPLTRAFRQAIRKAGGRPVFKLKTGT
CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
SDMNVLAPHWPVPMVAYGPGDSTLDHTPYEHVEVAEFLKGIEVLRGALEALAQTHAGEKE
CCCCEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA