Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is mshB [H]

Identifier: 55981713

GI number: 55981713

Start: 1634832

End: 1635497

Strand: Direct

Name: mshB [H]

Synonym: TTHA1744

Alternate gene names: 55981713

Gene position: 1634832-1635497 (Clockwise)

Preceding gene: 55981707

Following gene: 55981714

Centisome position: 88.38

GC content: 72.82

Gene sequence:

>666_bases
ATGGACCTCCTCGTGGTGGTGCCCCACCCGGACGACGAGAGCTTCGGCGCAGGGGGAGCCCTCCTCCTCGCCAAGGAGGC
GGGGCTTAAGACCGGGGTCCTCACCCTGACCCGGGGGGAAGCCGGGAGAACCCTTGGCCTCTGTCCCCCGGAGGAGCTGC
CCCAGGTGCGCGTGGAGGAGTTAAAGCGGGCCGCGGCCGTCCTTCAAGTGGACTACCTCGAGGTGCTGGACTACCCCAAC
GCCCTCCCCGAGGGCGCCCAAGGGGAGCGGGGGCCGGCCACGGGCCGGGGCCTCGCCGACCACCCCGAGGCGGTGGAGGC
GATCCGGACGCGGCTCCTCCGCCTCCGTCCCCGCTTCGTCCTCACCTTCCCCCCGGACGGCATCAACGGCCACCCCGACC
ACGTGGCGGCGAGCCGCTACGCCCGCGAGGCCGCCCAAGGCCTCGCCCAGGTGGTCTACCTGGTCCGCCCCGACGGCCCC
TGGCCCGTAACCCACCGCCTCCGCCTCCCCGAGAGGGTCTTGGCGCGGAAGCTCCAGGCCATCGCCCAGCACAAGACCCA
GGCCCTCTCCGTGCTGAAGTTCCTGGAGATGTTCCCCGAGCGCCTCTGGACCGAGACCTTCCACCTGCCGGGCGCCTCCG
GTCTCCGGGAGGGACCGTGGTGGTGA

Upstream 100 bases:

>100_bases
CAGATGCTTGGCCTGTTCCCGCGCTTTCAAGATCCCCCGCCGGCCCTGCCGGCGCACCTATGAATCTACCAAGCCCCCCT
CCTTCTGTCAAGATGGGGGC

Downstream 100 bases:

>100_bases
GGCCCCTGGACCACACCGCCGACGTGGGGTTTGCCCTCGAGGCCCAAAGCCTGGAGGAGCTCTTTCAGGCGGCCCTGAAG
GGCCTTCTAGACGTGATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN
ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP
WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW

Sequences:

>Translated_221_residues
MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN
ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP
WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW
>Mature_221_residues
MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN
ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP
WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW

Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MshB deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737
- InterPro:   IPR017810 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: =3.5.1.103 [H]

Molecular weight: Translated: 24309; Mature: 24309

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEE
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
LKRAAAVLQVDYLEVLDYPNALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
LTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGPWPVTHRLRLPERVLARKLQA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCCCCHHHHHHHHHH
IAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEE
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
LKRAAAVLQVDYLEVLDYPNALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
LTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGPWPVTHRLRLPERVLARKLQA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCCCCHHHHHHHHHH
IAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA