Click here to switch to the map view.

The map label for this gene is 55981673

Identifier: 55981673

GI number: 55981673

Start: 1599468

End: 1600250

Strand: Reverse

Name: 55981673

Synonym: TTHA1704

Alternate gene names: NA

Gene position: 1600250-1599468 (Counterclockwise)

Preceding gene: 55981676

Following gene: 55981672

Centisome position: 86.51

GC content: 73.95

Gene sequence:

>783_bases
ATGCTTTCGGGGGATCTGGCCGAGTTCCCGTTTCCCTCCCTGGTGGGGGCGCTGATGAGCGCCGGGCGCACGGGGAGGCT
GCACCTGCGTCCCCCTTTTTTGGAGGCCGAGGTCTACCTTCGGGGCGGGCAGGTGGTCCACGCCAAGGCCCAGGCGGGGG
AGAGGGCCTTGGAAGGGGAGGAGGCCCTGGACCTCCTGGTGGGGCTCAGGCGGGCCCCCTTCGTCTTTGAGCCCGAGGCG
CTTCCGCCCCACACCACCCTGCTTGGGGGCCTCGAGGTCCCGGCCCGGCTCGCCCAGGCCCAGGCCGCCTGGGAGAAGGT
CAAGCTGCCCGCCGACTGGGGCCTCCGCCTCCGCCTACCCCGGGAGGGGAGCGCGGTGGAGCTTCCCCCGGAGGCGCTAG
GCCTCCTCGCCCGGGTGGAGGGGAAGCGGATCGCCGAGGTCCTCCTCGCCCCCGGGGTGTTGCGGCAGGCCCGGGTCCTC
AGCACCCTCCTGGAGGTGGGGGCCCTGGAGGCCTACCCCGAGGTGGACCTTCCCCCCGAGCCCCTCGTGGTCCTCCCCAT
CTACGGGCCGGGCTCGGGGGTGGCCTACGTGGACGAGGCCCTCTACGCCCAGTGGGCCCGGGCCATCCGCCGAGGGTTTA
GGGTGCGGCTCCTGCCCCTGGGGGCGGTCCTCGAGGTCCGCCCCCGGCCCAACCTCCAGGGGAGGGTGGGGCTTATGGAG
GAGGACCTGAAGCGCCTGCGCCTCCGCCGGGGGGACAAGGTGGAGGCCGTGCCGGAGGTGTAG

Upstream 100 bases:

>100_bases
AGGACGGGGTGGGAAGTGAAGCCGTGGAGGAGGAGAAGGTGCATGCCTAAGCATACCCCGTCTGGACGGGAGGGTGCGCC
CGTGGTAAAACGTGGGGCGA

Downstream 100 bases:

>100_bases
CCCATGGACATCCTGGCCTGGAACGAAACCTTGAACCGCATCGTTTTCGGCTTTCCCATGAAGCTGGTCTACCTCCTGGT
GGGGGCCTACCTGGTGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLSGDLAEFPFPSLVGALMSAGRTGRLHLRPPFLEAEVYLRGGQVVHAKAQAGERALEGEEALDLLVGLRRAPFVFEPEA
LPPHTTLLGGLEVPARLAQAQAAWEKVKLPADWGLRLRLPREGSAVELPPEALGLLARVEGKRIAEVLLAPGVLRQARVL
STLLEVGALEAYPEVDLPPEPLVVLPIYGPGSGVAYVDEALYAQWARAIRRGFRVRLLPLGAVLEVRPRPNLQGRVGLME
EDLKRLRLRRGDKVEAVPEV

Sequences:

>Translated_260_residues
MLSGDLAEFPFPSLVGALMSAGRTGRLHLRPPFLEAEVYLRGGQVVHAKAQAGERALEGEEALDLLVGLRRAPFVFEPEA
LPPHTTLLGGLEVPARLAQAQAAWEKVKLPADWGLRLRLPREGSAVELPPEALGLLARVEGKRIAEVLLAPGVLRQARVL
STLLEVGALEAYPEVDLPPEPLVVLPIYGPGSGVAYVDEALYAQWARAIRRGFRVRLLPLGAVLEVRPRPNLQGRVGLME
EDLKRLRLRRGDKVEAVPEV
>Mature_260_residues
MLSGDLAEFPFPSLVGALMSAGRTGRLHLRPPFLEAEVYLRGGQVVHAKAQAGERALEGEEALDLLVGLRRAPFVFEPEA
LPPHTTLLGGLEVPARLAQAQAAWEKVKLPADWGLRLRLPREGSAVELPPEALGLLARVEGKRIAEVLLAPGVLRQARVL
STLLEVGALEAYPEVDLPPEPLVVLPIYGPGSGVAYVDEALYAQWARAIRRGFRVRLLPLGAVLEVRPRPNLQGRVGLME
EDLKRLRLRRGDKVEAVPEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28322; Mature: 28322

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGDLAEFPFPSLVGALMSAGRTGRLHLRPPFLEAEVYLRGGQVVHAKAQAGERALEGE
CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCEEEEEHHHCCHHHHCHH
EALDLLVGLRRAPFVFEPEALPPHTTLLGGLEVPARLAQAQAAWEKVKLPADWGLRLRLP
HHHHHHHHHHCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
REGSAVELPPEALGLLARVEGKRIAEVLLAPGVLRQARVLSTLLEVGALEAYPEVDLPPE
CCCCEEECCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PLVVLPIYGPGSGVAYVDEALYAQWARAIRRGFRVRLLPLGAVLEVRPRPNLQGRVGLME
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHH
EDLKRLRLRRGDKVEAVPEV
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSGDLAEFPFPSLVGALMSAGRTGRLHLRPPFLEAEVYLRGGQVVHAKAQAGERALEGE
CCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECCEEEEEHHHCCHHHHCHH
EALDLLVGLRRAPFVFEPEALPPHTTLLGGLEVPARLAQAQAAWEKVKLPADWGLRLRLP
HHHHHHHHHHCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
REGSAVELPPEALGLLARVEGKRIAEVLLAPGVLRQARVLSTLLEVGALEAYPEVDLPPE
CCCCEEECCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PLVVLPIYGPGSGVAYVDEALYAQWARAIRRGFRVRLLPLGAVLEVRPRPNLQGRVGLME
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHH
EDLKRLRLRRGDKVEAVPEV
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA