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The map label for this gene is yaaJ [C]

Identifier: 55981672

GI number: 55981672

Start: 1598109

End: 1599464

Strand: Reverse

Name: yaaJ [C]

Synonym: TTHA1703

Alternate gene names: 55981672

Gene position: 1599464-1598109 (Counterclockwise)

Preceding gene: 55981673

Following gene: 55981666

Centisome position: 86.47

GC content: 70.87

Gene sequence:

>1356_bases
ATGGACATCCTGGCCTGGAACGAAACCTTGAACCGCATCGTTTTCGGCTTTCCCATGAAGCTGGTCTACCTCCTGGTGGG
GGCCTACCTGGTGATCTTCCGGATCCGCTGGTTCAGCGCCCCCCTCAGGATGGCGCGGGTGGCCTTCAGCGAGACCCTGG
GGGCGATCCGGGAGCGGGCCTACGGCTTCGGCGGCCAGATCACCCCCTACCAGGCCACCATGGTGGCCCTCTCCGCCACC
CTGGGCACGGGCCACCTTTTGGGGATGCTGGCGGCGGTCCTCGTGGGGGGGCCGGGGGCGGTCTTCTGGATGTGGGTGGG
CTACTTCTTCGGCACCGGCACGAAGTTCGCCGAGGCCACCCTGGCGGTCCACTACCGCCGCCGCTTCGCCGACGGCTCCG
TTTCCGGCGGGCCCATGTACTACCTTTCCCGGGGGCTTCCTAGGCTGCGCTTCCTGGGCCACCTCTTCGCCTTCTTCGCC
GCGGTGGCCGCTTTTGGCATCGGCAACCTCTCCCAGGCGGGGGCGGTGGGGGGGGCCCTGGCCCCCTTGGGGGCCCCGCC
CGCTTTGGTGGGCCTCTTCCTCGCCCTTCTGGTGGGCCTCGTCCTGGGCGGGGGGATCGTGCGGGTGGCCCGCTTCGCCC
AGGTGGTGGTGCCCTTGAAGCTCCTCCTCTTCCTGGTGGCCTTGGGGCCCCTCCTCGTCCTTTACGCCGGGAGGATTCCC
GAGGCCCTGGCCCTGGTCTTCCAGGCCGCCTTCACCCCGGAGGCGGCCTTGGGCGGGGCCGCGGGCTACAGCCTCTTCGC
CGTAATCAACGCCGGGCTTGGCCGGGGCATCTTCGCCAACGAGGCGGGGCTGGGCTCGGCCGCCATCGCCCACGCCCAGG
CCCAGGTGGACCACCCCGTGCGCCAGGGGTTCTGGGGGGTCACGGAGATGCTCGTGAGCTTCCTGGTGACCTCCCTCACC
GCCCTCACCTTCGTCGCCTCCGGGCTTTGGCGGGAAGGGGGTGGCGCCGCCGAGGCCGCCCAGGCCCTCTTCCAGGCCCA
CCCCTTGGGAGGCGTGGTCCTCGCCCTCACCGTGGCGGTCTTCGCCCTGGGGACCATGGTCTCCTGGGGGTTTTACGGCG
AGGAGGCCGCGGCCTTCCTCCTCGGGGAGGGCGTTCGCTGGCCCTACCGCCTCGCCTTCGCCACCCTCGCCTTCGTGGGG
CCCTTGGGGGGCCTCGAGGCCTTTTTGGCCGTCTCCGACACCCTAAACGGCCTCATGGCCCTTCCCAACCTCCTGGGGCT
GGTCCTTCTGGGCGGGGTGGTGGGACGCCTGGTCTACGGCTTCTTCCGCGGGGAGCCCTGGGTGCCCCCCCGCTAA

Upstream 100 bases:

>100_bases
GCCCAACCTCCAGGGGAGGGTGGGGCTTATGGAGGAGGACCTGAAGCGCCTGCGCCTCCGCCGGGGGGACAAGGTGGAGG
CCGTGCCGGAGGTGTAGCCC

Downstream 100 bases:

>100_bases
GGCCACGGCCTAGGGCGGTCTCAGCGGAAGAGGGTCCTCACCGCCTTTTCCAGCTCCTCCCCCGCTTTCTTGTCCAGGGT
GAGCTTCACCTTGAGGGCCA

Product: sodium-alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDILAWNETLNRIVFGFPMKLVYLLVGAYLVIFRIRWFSAPLRMARVAFSETLGAIRERAYGFGGQITPYQATMVALSAT
LGTGHLLGMLAAVLVGGPGAVFWMWVGYFFGTGTKFAEATLAVHYRRRFADGSVSGGPMYYLSRGLPRLRFLGHLFAFFA
AVAAFGIGNLSQAGAVGGALAPLGAPPALVGLFLALLVGLVLGGGIVRVARFAQVVVPLKLLLFLVALGPLLVLYAGRIP
EALALVFQAAFTPEAALGGAAGYSLFAVINAGLGRGIFANEAGLGSAAIAHAQAQVDHPVRQGFWGVTEMLVSFLVTSLT
ALTFVASGLWREGGGAAEAAQALFQAHPLGGVVLALTVAVFALGTMVSWGFYGEEAAAFLLGEGVRWPYRLAFATLAFVG
PLGGLEAFLAVSDTLNGLMALPNLLGLVLLGGVVGRLVYGFFRGEPWVPPR

Sequences:

>Translated_451_residues
MDILAWNETLNRIVFGFPMKLVYLLVGAYLVIFRIRWFSAPLRMARVAFSETLGAIRERAYGFGGQITPYQATMVALSAT
LGTGHLLGMLAAVLVGGPGAVFWMWVGYFFGTGTKFAEATLAVHYRRRFADGSVSGGPMYYLSRGLPRLRFLGHLFAFFA
AVAAFGIGNLSQAGAVGGALAPLGAPPALVGLFLALLVGLVLGGGIVRVARFAQVVVPLKLLLFLVALGPLLVLYAGRIP
EALALVFQAAFTPEAALGGAAGYSLFAVINAGLGRGIFANEAGLGSAAIAHAQAQVDHPVRQGFWGVTEMLVSFLVTSLT
ALTFVASGLWREGGGAAEAAQALFQAHPLGGVVLALTVAVFALGTMVSWGFYGEEAAAFLLGEGVRWPYRLAFATLAFVG
PLGGLEAFLAVSDTLNGLMALPNLLGLVLLGGVVGRLVYGFFRGEPWVPPR
>Mature_451_residues
MDILAWNETLNRIVFGFPMKLVYLLVGAYLVIFRIRWFSAPLRMARVAFSETLGAIRERAYGFGGQITPYQATMVALSAT
LGTGHLLGMLAAVLVGGPGAVFWMWVGYFFGTGTKFAEATLAVHYRRRFADGSVSGGPMYYLSRGLPRLRFLGHLFAFFA
AVAAFGIGNLSQAGAVGGALAPLGAPPALVGLFLALLVGLVLGGGIVRVARFAQVVVPLKLLLFLVALGPLLVLYAGRIP
EALALVFQAAFTPEAALGGAAGYSLFAVINAGLGRGIFANEAGLGSAAIAHAQAQVDHPVRQGFWGVTEMLVSFLVTSLT
ALTFVASGLWREGGGAAEAAQALFQAHPLGGVVLALTVAVFALGTMVSWGFYGEEAAAFLLGEGVRWPYRLAFATLAFVG
PLGGLEAFLAVSDTLNGLMALPNLLGLVLLGGVVGRLVYGFFRGEPWVPPR

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=447, Percent_Identity=31.7673378076063, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47270; Mature: 47270

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]