| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981584
Identifier: 55981584
GI number: 55981584
Start: 1531672
End: 1532100
Strand: Direct
Name: 55981584
Synonym: TTHA1615
Alternate gene names: NA
Gene position: 1531672-1532100 (Clockwise)
Preceding gene: 55981581
Following gene: 55981585
Centisome position: 82.8
GC content: 67.37
Gene sequence:
>429_bases ATGCTGCACGCCAAGATTGAAACCCTGGGCGTGGACCCCCAGAACGGCAGCGTGGTGGTCCTGCTCAGGACGGAAAACGA CAAGCTCCTCCCCATCGTCATCGGCCCCCTCGAGGCCCACCACATCGTGGTGGCCCTCCAAGGGGAAAAGCCCCCAAGGC CCCTCACCCCCGACCTCCTCCTCTCGGTGATGGAGATGCTCCAGGCCAAGCTCAAGCGGGTGGAGATCGTTGACCTTAGG GACGGCACCTTTTACGCCCGCCTCATCCTGGAGCACCGGGGGATTGAGCTGGAGGTGGACGCCCGTCCCTCCGACGCCAT GGCCCTGGCCCTCAGGGCGGGGGCGCCCATCCTGGTGGCGGAGGAGGTGGTGGAGAAGGCGGGCGTGGAGGAGGCCAACA TCCGCCCCCACGGGGCGGCGGAAGCCTAA
Upstream 100 bases:
>100_bases CACGGCCACGCCCGGCCCCACCTGGACGATGGGGAGCTCCCTGCGCACGCCGGCGATCTCAACGGGGTAGGTCCTCACGG GCCCAGTCTATACTGAGGGC
Downstream 100 bases:
>100_bases GCGGCGTTCCTCAGAGCGGGGGGCCGGGGCCATGCTTGGCCACCGAGGGACGGGCGCTCGCCTCCTGCGCCTCTTCGTCC CCTTTCTTTTCGCCCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLHAKIETLGVDPQNGSVVVLLRTENDKLLPIVIGPLEAHHIVVALQGEKPPRPLTPDLLLSVMEMLQAKLKRVEIVDLR DGTFYARLILEHRGIELEVDARPSDAMALALRAGAPILVAEEVVEKAGVEEANIRPHGAAEA
Sequences:
>Translated_142_residues MLHAKIETLGVDPQNGSVVVLLRTENDKLLPIVIGPLEAHHIVVALQGEKPPRPLTPDLLLSVMEMLQAKLKRVEIVDLR DGTFYARLILEHRGIELEVDARPSDAMALALRAGAPILVAEEVVEKAGVEEANIRPHGAAEA >Mature_142_residues MLHAKIETLGVDPQNGSVVVLLRTENDKLLPIVIGPLEAHHIVVALQGEKPPRPLTPDLLLSVMEMLQAKLKRVEIVDLR DGTFYARLILEHRGIELEVDARPSDAMALALRAGAPILVAEEVVEKAGVEEANIRPHGAAEA
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 15423; Mature: 15423
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHAKIETLGVDPQNGSVVVLLRTENDKLLPIVIGPLEAHHIVVALQGEKPPRPLTPDLL CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCHHHH LSVMEMLQAKLKRVEIVDLRDGTFYARLILEHRGIELEVDARPSDAMALALRAGAPILVA HHHHHHHHHHHHEEEEEEECCCCEEEEEEEHHCCCEEEECCCCCCCEEEEECCCCCEEEH EEVVEKAGVEEANIRPHGAAEA HHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHAKIETLGVDPQNGSVVVLLRTENDKLLPIVIGPLEAHHIVVALQGEKPPRPLTPDLL CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCHHHH LSVMEMLQAKLKRVEIVDLRDGTFYARLILEHRGIELEVDARPSDAMALALRAGAPILVA HHHHHHHHHHHHEEEEEEECCCCEEEEEEEHHCCCEEEECCCCCCCEEEEECCCCCEEEH EEVVEKAGVEEANIRPHGAAEA HHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]