| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yihX [C]
Identifier: 55981581
GI number: 55981581
Start: 1529968
End: 1530579
Strand: Direct
Name: yihX [C]
Synonym: TTHA1612
Alternate gene names: 55981581
Gene position: 1529968-1530579 (Clockwise)
Preceding gene: 55981580
Following gene: 55981584
Centisome position: 82.71
GC content: 73.2
Gene sequence:
>612_bases ATGCGCGGGGCCCTTTTGGACCGCGATGGGGTCCTCCTCCTTTTGGACGAGAAGGCCCTTTACCGGAAGGCCGTGGAGCT TGCGGCGCGGGGCGCCGGGCTGGAGCGGAGCCTGGCCGCCTTGGCCCGCGCGGTGCGGGCCTTGAACGAGGCGGTGCGGG GGCTTGCGGTGCGGACCCTGGAGGAGGAGGAGGCCCTCTGGCGGACCCTGGTCCTCGAGGTGGCCCGGGAGCTACGGGTG CCGCCCGAGGAGCTTCTCCCCTGGAGGTACTACCGCTTCATGCGGCCCGCCCCCGGGGCCGAGCGCCTACTGCACAGGCT CAAGGCCCGGAACCTCAAGGTAGGCGTCCTCTCCAACACCCTGCCGAGCCTCCGGGAAAGCCTGGCCCACCACGGCCTCG CCCGGTACGTGGACGGCTTCTTCGCCTCCTGCGCCCTGGGGGTGGCCAAGCCCGACCCCCGGGCCTTCCTCCTCGCCCTG GAGGGCCTGGGCCTCGCCCCTGAGGAGACCCTCTACCTGGACGACGACCCCGAGAACGTGGAGGCCGCCCGGAGGCTCGG CCTCCGGGCGGAGGTCTACGCGCCCATAGGGGCGCCAGGGCGCCGGGCTTAG
Upstream 100 bases:
>100_bases ACCCCTGGGACGTGCCCGTGGACCACCTGGCCACGGAGGCGGGGGTGGAGGCGGTCAAACGCCCAGCCCCGGGCCCCGGG GGCCTGCTAGACTAGGCCCC
Downstream 100 bases:
>100_bases AGCACGGGAAGCTCCGCCACCGTGTCCACGGCGAGGCCGGGCGTGCCCTGGCGGAAGACCGCCAGGCGGGCCACCACGTG CCCTCCCGCCCGGAGGACCA
Product: hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRGALLDRDGVLLLLDEKALYRKAVELAARGAGLERSLAALARAVRALNEAVRGLAVRTLEEEEALWRTLVLEVARELRV PPEELLPWRYYRFMRPAPGAERLLHRLKARNLKVGVLSNTLPSLRESLAHHGLARYVDGFFASCALGVAKPDPRAFLLAL EGLGLAPEETLYLDDDPENVEAARRLGLRAEVYAPIGAPGRRA
Sequences:
>Translated_203_residues MRGALLDRDGVLLLLDEKALYRKAVELAARGAGLERSLAALARAVRALNEAVRGLAVRTLEEEEALWRTLVLEVARELRV PPEELLPWRYYRFMRPAPGAERLLHRLKARNLKVGVLSNTLPSLRESLAHHGLARYVDGFFASCALGVAKPDPRAFLLAL EGLGLAPEETLYLDDDPENVEAARRLGLRAEVYAPIGAPGRRA >Mature_203_residues MRGALLDRDGVLLLLDEKALYRKAVELAARGAGLERSLAALARAVRALNEAVRGLAVRTLEEEEALWRTLVLEVARELRV PPEELLPWRYYRFMRPAPGAERLLHRLKARNLKVGVLSNTLPSLRESLAHHGLARYVDGFFASCALGVAKPDPRAFLLAL EGLGLAPEETLYLDDDPENVEAARRLGLRAEVYAPIGAPGRRA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22446; Mature: 22446
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGALLDRDGVLLLLDEKALYRKAVELAARGAGLERSLAALARAVRALNEAVRGLAVRTL CCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEALWRTLVLEVARELRVPPEELLPWRYYRFMRPAPGAERLLHRLKARNLKVGVLSNT HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHH LPSLRESLAHHGLARYVDGFFASCALGVAKPDPRAFLLALEGLGLAPEETLYLDDDPENV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCHHH EAARRLGLRAEVYAPIGAPGRRA HHHHHCCCCCEEEECCCCCCCCC >Mature Secondary Structure MRGALLDRDGVLLLLDEKALYRKAVELAARGAGLERSLAALARAVRALNEAVRGLAVRTL CCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEALWRTLVLEVARELRVPPEELLPWRYYRFMRPAPGAERLLHRLKARNLKVGVLSNT HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHH LPSLRESLAHHGLARYVDGFFASCALGVAKPDPRAFLLALEGLGLAPEETLYLDDDPENV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCHHH EAARRLGLRAEVYAPIGAPGRRA HHHHHCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA