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The map label for this gene is ybgI [C]

Identifier: 55981575

GI number: 55981575

Start: 1526776

End: 1527504

Strand: Direct

Name: ybgI [C]

Synonym: TTHA1606

Alternate gene names: 55981575

Gene position: 1526776-1527504 (Clockwise)

Preceding gene: 55981573

Following gene: 55981576

Centisome position: 82.54

GC content: 68.04

Gene sequence:

>729_bases
ATGGACCGGGACGAGCTGGTGCGCTACCTGGACGCCTACCTGAGGATCCAGGACTTCCCCCAGGACCCCTCCCTGAACGG
CCTCCAGGTGGAGGGGAAGAGGACCGTCCGCAAGGTGGGGGCGGCGGTGGACGCCGGGGAGGCCATCTTCCGGAAGGCCC
TGGAAGAGGAGGTGGACTTCCTCATCGTCCACCACGGCCTCTTCTGGGGAAAGCCCTTCCCCATCGTGGGCCACCACAAG
CGCCGCCTGGAGACCCTCTTCCAAGGGGGGATCAACCTCTACGCCGCCCACCTGCCCCTGGACGCCCACGAGGAGGTGGG
CAACAACTTCGTCCTGGCCCGGGAGCTCGGGCTTGTGGACCTCACGCCCTGGGACGTGGGGGTGAAAGGGCGCTTCCCCC
AGCCCACCCCCCTCCTGCAGGTGGCCGACCGCCTGGGCCAGCTCACCGGGATGCAGCCTTTGGTGCACCAAGGAGGCCTG
GACCACGTGGAGACGGTGATCCTCGTCTCAGGCTCGGGAACGGGCCTCCTCCCCAAGGTGGACGCCGACCTCTTCGTCAC
CGGGGAGCCCAAGCACAGCGTCTTTCACGAGACCTTTGAGCGGGGCCTCAACGTCATTTACGCCGGCCACTACGACACGG
AGACCTTCGGGGTGAAGGCCCTCGCCGCCCACCTCGAGGCCCGCTTCGGCCTCCCCTGGGTCTTCCTGGACCACCCCACG
GGGCTTTAG

Upstream 100 bases:

>100_bases
GAAGCGGAGCTTCAGCAGGGTTTCGGGCTCCATGCCGTCATAATACTGACCGGTCATCCGCCCGCAAAGCCCCCCGGGAG
GCATCGGGTAAGCTTTCCCC

Downstream 100 bases:

>100_bases
ATGCCGGGGCTCTTCCTCACCCTCGAGGGCCTGGACGGCAGCGGCAAGACCACCCAGGCGAGGCGGCTCGCCGCCTTCCT
GGAGGCCCAGGGCCGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHK
RRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVDLTPWDVGVKGRFPQPTPLLQVADRLGQLTGMQPLVHQGGL
DHVETVILVSGSGTGLLPKVDADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAHLEARFGLPWVFLDHPT
GL

Sequences:

>Translated_242_residues
MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHK
RRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVDLTPWDVGVKGRFPQPTPLLQVADRLGQLTGMQPLVHQGGL
DHVETVILVSGSGTGLLPKVDADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAHLEARFGLPWVFLDHPT
GL
>Mature_242_residues
MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHK
RRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVDLTPWDVGVKGRFPQPTPLLQVADRLGQLTGMQPLVHQGGL
DHVETVILVSGSGTGLLPKVDADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAHLEARFGLPWVFLDHPT
GL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=36.2549800796813, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26832; Mature: 26832

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDF
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCE
LIVHHGLFWGKPFPIVGHHKRRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVD
EEEECCHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCEEEEEECCEEE
LTPWDVGVKGRFPQPTPLLQVADRLGQLTGMQPLVHQGGLDHVETVILVSGSGTGLLPKV
ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCCCCEEC
DADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAHLEARFGLPWVFLDHPT
CCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC
GL
CC
>Mature Secondary Structure
MDRDELVRYLDAYLRIQDFPQDPSLNGLQVEGKRTVRKVGAAVDAGEAIFRKALEEEVDF
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCE
LIVHHGLFWGKPFPIVGHHKRRLETLFQGGINLYAAHLPLDAHEEVGNNFVLARELGLVD
EEEECCHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCEEEEEECCEEE
LTPWDVGVKGRFPQPTPLLQVADRLGQLTGMQPLVHQGGLDHVETVILVSGSGTGLLPKV
ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCCCCEEC
DADLFVTGEPKHSVFHETFERGLNVIYAGHYDTETFGVKALAAHLEARFGLPWVFLDHPT
CCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC
GL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]