Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981565

Identifier: 55981565

GI number: 55981565

Start: 1518681

End: 1520396

Strand: Direct

Name: 55981565

Synonym: TTHA1596

Alternate gene names: NA

Gene position: 1518681-1520396 (Clockwise)

Preceding gene: 55981555

Following gene: 55981566

Centisome position: 82.1

GC content: 72.79

Gene sequence:

>1716_bases
GTGGACCACCTGGACGACCTGGTGGACCTCTACGAGTACCGGGTGGAGGACCTCCTCCAGGGCCGCACGCCTAAAGGGGG
GAAGCAGGCCCTCCTAAGGCTCCGCCAACTCCTCATCCAGTCCCGCCTGCCGGGGCCCTTGGCCAAGCGCTTCCGCCAGG
CGGACGCCCGCTTCCGCGCCCAAAGGCGGGCCCTCGCCCCCGAGGCCCAAGCCCCCGTGGAGCTCCCCGCCATCGCCGTG
CCCGAGGAGCCCGAGCCCCCGCCTCCGGAGGCGAGCCCCCTGGCCGCCCTAGCCCTCAAGGTGTGGCGGCTCCAGGTGGA
GCGGGACGTGAAGGCCCGCCTCGAGGCCCTCCTCGCGGGGAGGCGGGAGGAGCTCCGGCTCATCCACGCCTTCCTGGACA
ACTTCGCCCTCTACCGGGAGACCCCGGGGTTCAAGAGGGACTTCAACCTCTCCCGCTTCGTCCCCACCCGTCCCATCCCC
TCCCTCTCCGACACGCTCGTGGACCTGGACGACCCCAAGGTGGCCCAGGCCCTGGTGGTGGACTTCCTGGAGACGGCGCG
GGAGCTTCCCAAGCTCCTCCCCCTTCCCCCGGAGGAGACGCGCACCTACGTCCGGCGCTTCCTGAACCGCCTCCTGGAGT
GGGAGGGGGCCTACAACCTGCCGCCCAAGCCCGACCTCCCCGCCCTCCGCCGGGCCCTGGAGGAGGCCCGCCGCCTGGGC
GCGGGCGAGAAGGAGGTGGCCCAGCTGGAGGAGCGCCTGCGCAAGGCGGCCCAGGAGGCGAGGCGGCGGGACCTCCTCCT
GGAGGAGGAGAAGGGACGGTTCCGCGTGGCCCTGGAGAAGGTGGTCGCCCTCCTCAGCCTCCTCCCCACCCCCCAGGGGG
AGACCCCCTGGCCCAGGGTCCCCGAGCCCGGGCAAGAGGAGGAGGGCCTCCTCACCCTGCGCCTCGCCCCGGGCCCCGTG
GCCCTCGGCCCCCTCACCCTCACCCTGAGCCACGCGGGGGGCACCTGGTACCTGGGCCTCGAGGGGGAGGACCACCCCCT
GGAGGACACCCTCGTCCTCCCCTGGGAGGACCTGGAGGTCTGGGCGGTGCGGGAGAACGACCTCCTCCACCTGAGGCTCG
AGGCCCGAAGCGGCCTCCGTCTCTACGAGCTTCTGGCCGAGGGAAGGCTCCTCGCCTACCTCCTTCACCCGGGAAAGGAC
TACGCCTACCTCCGGCTCCTGAGGGGGCTTTCCACCCGCCTCAAAGGCGAGTTCCAGGCCCAGGCCTTCGGCCCCGCCCT
GGCGGAGAAGTACCGCAAAGCGCCGGAAGAGGCCCTCCAGGACTTCGCCCGCAAGGGCCTGGAGCTCACCCTCAAGCGCC
TGGGCCAGGCCGACCCCCTTCCCCTCCTCCAAGAGGTGGGCCAGGCCCTGGGCCTGGAGGCGGAGGCCCAGACCCTGGGC
CAAGCCCTCCGGGAGTACCTGGGCCGCCGCCCCCCCACCCGGGAGACCCTCGGGGGGGAGGTCCACTTCCTGGCCCTGAC
CCCCGAGCCCCAGGCCCTGAAGCTGGACCAGCACGTCCTCTCCGTGCGCCTGAAGGAGGACGCCGTCTACCTGGGCCAGG
CGGGGGAGGTGCCGAGGCGGCTAAAAGACCTCCTGGTCTACCGCCTGGGGGAAAGGGCCCTGGTCCTGGCCCGGGAAGGG
CGCCGCCTGGCCTACACCCTCCTCCCCCTCCCTTGA

Upstream 100 bases:

>100_bases
GTGGAAGTCCTCGTTGTTCTGGCGGCGGCCCACGTGGGAAACGGCGGCCACGCTCAGCCGGGGACCGATGCGCATCGGCT
CCATTGTATAGGATGGAGGC

Downstream 100 bases:

>100_bases
CCTGGAGAACGGCCAAGGTATAATCCGCTCCAAGGAGCGGCGATGCGGGTCTTGCGCCATAAGGCCTTCGCCCGCCTGGT
GGCGGCCTACCTGGTCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV
PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP
SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG
AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV
ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD
YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG
QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG
RRLAYTLLPLP

Sequences:

>Translated_571_residues
MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV
PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP
SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG
AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV
ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD
YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG
QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG
RRLAYTLLPLP
>Mature_571_residues
MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV
PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP
SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG
AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV
ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD
YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG
QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG
RRLAYTLLPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64514; Mature: 64514

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QRRALAPEAQAPVELPAIAVPEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAG
HHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIPSLSDTLVDLDDPKVAQALVV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
DFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRV
CCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PEPGQEEEGLLTLRLAPGPVALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEV
CCCCCCCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCEE
WAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKDYAYLRLLRGLSTRLKGEFQA
EEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH
QAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRR
HHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEECCCCCHHHH
LKDLLVYRLGERALVLAREGRRLAYTLLPLP
HHHHHHHHHCCCEEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRA
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QRRALAPEAQAPVELPAIAVPEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAG
HHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIPSLSDTLVDLDDPKVAQALVV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH
DFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRV
CCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PEPGQEEEGLLTLRLAPGPVALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEV
CCCCCCCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCEE
WAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKDYAYLRLLRGLSTRLKGEFQA
EEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH
QAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRR
HHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEECCCCCHHHH
LKDLLVYRLGERALVLAREGRRLAYTLLPLP
HHHHHHHHHCCCEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA