| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981565
Identifier: 55981565
GI number: 55981565
Start: 1518681
End: 1520396
Strand: Direct
Name: 55981565
Synonym: TTHA1596
Alternate gene names: NA
Gene position: 1518681-1520396 (Clockwise)
Preceding gene: 55981555
Following gene: 55981566
Centisome position: 82.1
GC content: 72.79
Gene sequence:
>1716_bases GTGGACCACCTGGACGACCTGGTGGACCTCTACGAGTACCGGGTGGAGGACCTCCTCCAGGGCCGCACGCCTAAAGGGGG GAAGCAGGCCCTCCTAAGGCTCCGCCAACTCCTCATCCAGTCCCGCCTGCCGGGGCCCTTGGCCAAGCGCTTCCGCCAGG CGGACGCCCGCTTCCGCGCCCAAAGGCGGGCCCTCGCCCCCGAGGCCCAAGCCCCCGTGGAGCTCCCCGCCATCGCCGTG CCCGAGGAGCCCGAGCCCCCGCCTCCGGAGGCGAGCCCCCTGGCCGCCCTAGCCCTCAAGGTGTGGCGGCTCCAGGTGGA GCGGGACGTGAAGGCCCGCCTCGAGGCCCTCCTCGCGGGGAGGCGGGAGGAGCTCCGGCTCATCCACGCCTTCCTGGACA ACTTCGCCCTCTACCGGGAGACCCCGGGGTTCAAGAGGGACTTCAACCTCTCCCGCTTCGTCCCCACCCGTCCCATCCCC TCCCTCTCCGACACGCTCGTGGACCTGGACGACCCCAAGGTGGCCCAGGCCCTGGTGGTGGACTTCCTGGAGACGGCGCG GGAGCTTCCCAAGCTCCTCCCCCTTCCCCCGGAGGAGACGCGCACCTACGTCCGGCGCTTCCTGAACCGCCTCCTGGAGT GGGAGGGGGCCTACAACCTGCCGCCCAAGCCCGACCTCCCCGCCCTCCGCCGGGCCCTGGAGGAGGCCCGCCGCCTGGGC GCGGGCGAGAAGGAGGTGGCCCAGCTGGAGGAGCGCCTGCGCAAGGCGGCCCAGGAGGCGAGGCGGCGGGACCTCCTCCT GGAGGAGGAGAAGGGACGGTTCCGCGTGGCCCTGGAGAAGGTGGTCGCCCTCCTCAGCCTCCTCCCCACCCCCCAGGGGG AGACCCCCTGGCCCAGGGTCCCCGAGCCCGGGCAAGAGGAGGAGGGCCTCCTCACCCTGCGCCTCGCCCCGGGCCCCGTG GCCCTCGGCCCCCTCACCCTCACCCTGAGCCACGCGGGGGGCACCTGGTACCTGGGCCTCGAGGGGGAGGACCACCCCCT GGAGGACACCCTCGTCCTCCCCTGGGAGGACCTGGAGGTCTGGGCGGTGCGGGAGAACGACCTCCTCCACCTGAGGCTCG AGGCCCGAAGCGGCCTCCGTCTCTACGAGCTTCTGGCCGAGGGAAGGCTCCTCGCCTACCTCCTTCACCCGGGAAAGGAC TACGCCTACCTCCGGCTCCTGAGGGGGCTTTCCACCCGCCTCAAAGGCGAGTTCCAGGCCCAGGCCTTCGGCCCCGCCCT GGCGGAGAAGTACCGCAAAGCGCCGGAAGAGGCCCTCCAGGACTTCGCCCGCAAGGGCCTGGAGCTCACCCTCAAGCGCC TGGGCCAGGCCGACCCCCTTCCCCTCCTCCAAGAGGTGGGCCAGGCCCTGGGCCTGGAGGCGGAGGCCCAGACCCTGGGC CAAGCCCTCCGGGAGTACCTGGGCCGCCGCCCCCCCACCCGGGAGACCCTCGGGGGGGAGGTCCACTTCCTGGCCCTGAC CCCCGAGCCCCAGGCCCTGAAGCTGGACCAGCACGTCCTCTCCGTGCGCCTGAAGGAGGACGCCGTCTACCTGGGCCAGG CGGGGGAGGTGCCGAGGCGGCTAAAAGACCTCCTGGTCTACCGCCTGGGGGAAAGGGCCCTGGTCCTGGCCCGGGAAGGG CGCCGCCTGGCCTACACCCTCCTCCCCCTCCCTTGA
Upstream 100 bases:
>100_bases GTGGAAGTCCTCGTTGTTCTGGCGGCGGCCCACGTGGGAAACGGCGGCCACGCTCAGCCGGGGACCGATGCGCATCGGCT CCATTGTATAGGATGGAGGC
Downstream 100 bases:
>100_bases CCTGGAGAACGGCCAAGGTATAATCCGCTCCAAGGAGCGGCGATGCGGGTCTTGCGCCATAAGGCCTTCGCCCGCCTGGT GGCGGCCTACCTGGTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG RRLAYTLLPLP
Sequences:
>Translated_571_residues MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG RRLAYTLLPLP >Mature_571_residues MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRAQRRALAPEAQAPVELPAIAV PEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAGRREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIP SLSDTLVDLDDPKVAQALVVDFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRVPEPGQEEEGLLTLRLAPGPV ALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEVWAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKD YAYLRLLRGLSTRLKGEFQAQAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRRLKDLLVYRLGERALVLAREG RRLAYTLLPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64514; Mature: 64514
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRA CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QRRALAPEAQAPVELPAIAVPEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAG HHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIPSLSDTLVDLDDPKVAQALVV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH DFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRV CCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PEPGQEEEGLLTLRLAPGPVALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEV CCCCCCCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCEE WAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKDYAYLRLLRGLSTRLKGEFQA EEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH QAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRR HHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEECCCCCHHHH LKDLLVYRLGERALVLAREGRRLAYTLLPLP HHHHHHHHHCCCEEEEEECCCEEEEEECCCC >Mature Secondary Structure MDHLDDLVDLYEYRVEDLLQGRTPKGGKQALLRLRQLLIQSRLPGPLAKRFRQADARFRA CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QRRALAPEAQAPVELPAIAVPEEPEPPPPEASPLAALALKVWRLQVERDVKARLEALLAG HHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RREELRLIHAFLDNFALYRETPGFKRDFNLSRFVPTRPIPSLSDTLVDLDDPKVAQALVV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH DFLETARELPKLLPLPPEETRTYVRRFLNRLLEWEGAYNLPPKPDLPALRRALEEARRLG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC AGEKEVAQLEERLRKAAQEARRRDLLLEEEKGRFRVALEKVVALLSLLPTPQGETPWPRV CCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PEPGQEEEGLLTLRLAPGPVALGPLTLTLSHAGGTWYLGLEGEDHPLEDTLVLPWEDLEV CCCCCCCCCEEEEEECCCCEEECCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCEE WAVRENDLLHLRLEARSGLRLYELLAEGRLLAYLLHPGKDYAYLRLLRGLSTRLKGEFQA EEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH QAFGPALAEKYRKAPEEALQDFARKGLELTLKRLGQADPLPLLQEVGQALGLEAEAQTLG HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH QALREYLGRRPPTRETLGGEVHFLALTPEPQALKLDQHVLSVRLKEDAVYLGQAGEVPRR HHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEECCCCCHHHH LKDLLVYRLGERALVLAREGRRLAYTLLPLP HHHHHHHHHCCCEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA