| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is tthHB8IM
Identifier: 55981552
GI number: 55981552
Start: 1506201
End: 1507487
Strand: Direct
Name: tthHB8IM
Synonym: TTHA1583
Alternate gene names: 55981552
Gene position: 1506201-1507487 (Clockwise)
Preceding gene: 55981551
Following gene: 55981553
Centisome position: 81.43
GC content: 60.3
Gene sequence:
>1287_bases ATGCTCTTTCCTCCTTCCCTACCCCCTACGGCCTCCGGGCGAAGCCTGGGCCGAGTAGAAACCCCACCAGGGCTAGTGCG CTTCATGGTGGGGCTCGCCGAGGCCCCGAAAGGGGGAAGGGTCCTGGAACCCGCCTGCGCGGACGGGCCCTTCCTCCGGG CCTTCCGGGAGGCCCACGGGACGGGCTACCGCTTCGTGGGGGTGGAGATCGACCCACACGCCCTGGACCTTCCCCCTTGG GCGGAAGGGGTGGTGGCGGACTTCCTCCTCTGGGAGCCCGGGGAAGCCTTTGACCTCATCTTGGGCAACCCGCCCTACGG CATCGTGGGGGAGGCCAGCAAGTACCCCATCCACGTCCTTAGGGAGGTCAAGGGGCTTTACAAGAAGACCCTATCCACCT GGAAGGGCAAGTACAACCTTTACGGGGCCTTCATAGAGAAATCTGTGCGCCTCTTGAGGGAGGGCGGAACCCTGGTCTTC GTAGTCCCGGCCACGTGGCTCGTCCTGGACGACTTTTCCCTCCTTCGGTCATTTCTGGCCCGAGAAGGGAGAACAGAAGT TTACTATCTAGGCGAGGTCTTCCCCGGAAGAAAGGTGAGCGCTGTGGTTCTTCGGTTCCGGAAGGGAGGAAAAGGCCTCG CCCTTTGGGACACCCGGAGAGACGGGGAGACCTTCACGCCCCTCTTGTGGAGCGAGAAGCCGGAATGGAAGGGAGAGATC ATCCGCTTCGAAACAGGGTGGACCAGGGAGATGGAGGCCTCGGGTCCACCCCTAGGTAGCCTATTCCACATCCGCTTCGC CGCCAGGAGCCCGGAGTTCAAGAAGCATCCCGCCGTCCAAAAGGAACCGGAACCTGGCCTTGTGCCCGTCCTGACGGGAA GGAACCTGAAGCCGGGGTGGATAGACTACGAAAGCAACCACTCCGGCCTTTGGATGCCCAAGGAAAGGGCCAAGGAGCTT AGGGACTTCTACGCCACGCCCCACTTGGTGGTGGCCCACACTAAGGGCACCAAGGTGGTAGCCGCTTGGGACGAGAAGGC CTACCCGTGGAGAGAAGAGTTCCACCTTCTGCCCAAGGAGGGTGTGGAACTAGACCCCTTGTTTCTGGTAGAGTGGTTAA ACTCCGATAAGATACAAGAGTATGTCAAAACCCTTTACAGGGACTTTGTTCCTCACTTGACGCTTAGAATGTTGGAGCGG ATACCTGCGTTGCTTCCCCGAAAGGGGAACACCGAGAGGAGGAAACATGGCCCCTACACAAGCCCAGAAAGTGCTGGAAG CTTTTGA
Upstream 100 bases:
>100_bases ATCCGCAACATCGTCACCGCCGCCCACACGAAGGAGATGCTGGACAAGGCCCTCGAGGCCTACGAGAAGGTGGGCAAGAG GCTCGGTATAATCCGCTAAG
Downstream 100 bases:
>100_bases GGATTTTCTGAAGTGTTTGGACCTCGAGAGCTACCAAGAAAAATACCGCCCCATCAAAACAGTAGAGCAAGACCTACCTA GAGAGCTTAACCCACTTCCA
Product: adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.TthHB8I; Adenine-specific methyltransferase TthHB8I
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGPFLRAFREAHGTGYRFVGVEIDPHALDLPPW AEGVVADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVLREVKGLYKKTLSTWKGKYNLYGAFIEKSVRLLREGGTLVF VVPATWLVLDDFSLLRSFLAREGRTEVYYLGEVFPGRKVSAVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEI IRFETGWTREMEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGWIDYESNHSGLWMPKERAKEL RDFYATPHLVVAHTKGTKVVAAWDEKAYPWREEFHLLPKEGVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLER IPALLPRKGNTERRKHGPYTSPESAGSF
Sequences:
>Translated_428_residues MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGPFLRAFREAHGTGYRFVGVEIDPHALDLPPW AEGVVADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVLREVKGLYKKTLSTWKGKYNLYGAFIEKSVRLLREGGTLVF VVPATWLVLDDFSLLRSFLAREGRTEVYYLGEVFPGRKVSAVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEI IRFETGWTREMEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGWIDYESNHSGLWMPKERAKEL RDFYATPHLVVAHTKGTKVVAAWDEKAYPWREEFHLLPKEGVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLER IPALLPRKGNTERRKHGPYTSPESAGSF >Mature_428_residues MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGPFLRAFREAHGTGYRFVGVEIDPHALDLPPW AEGVVADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVLREVKGLYKKTLSTWKGKYNLYGAFIEKSVRLLREGGTLVF VVPATWLVLDDFSLLRSFLAREGRTEVYYLGEVFPGRKVSAVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEI IRFETGWTREMEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGWIDYESNHSGLWMPKERAKEL RDFYATPHLVVAHTKGTKVVAAWDEKAYPWREEFHLLPKEGVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLER IPALLPRKGNTERRKHGPYTSPESAGSF
Specific function: This methylase recognizes the double-stranded sequence TCGA, causes specific methylation on A-4 on both strands and protects the DNA from cleavage by the TthHB8I endonuclease
COG id: COG0827
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTT8_THET8 (P29749)
Other databases:
- EMBL: M74795 - EMBL: AP008226 - PIR: JH0634 - RefSeq: YP_144849.1 - ProteinModelPortal: P29749 - SMR: P29749 - STRING: P29749 - REBASE: 3523 - GeneID: 3169149 - GenomeReviews: AP008226_GR - KEGG: ttj:TTHA1583 - NMPDR: fig|300852.3.peg.1895 - eggNOG: COG0827 - HOGENOM: HBG414874 - OMA: PWREEFH - ProtClustDB: CLSK738767 - BioCyc: TTHE300852:TTHA1583-MONOMER - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR021188 - InterPro: IPR023135 - InterPro: IPR011639 - Gene3D: G3DSA:3.90.220.10 - PIRSF: PIRSF037236 - PRINTS: PR00507
Pfam domain/function: PF07669 Eco57I
EC number: =2.1.1.72
Molecular weight: Translated: 48408; Mature: 48408
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGPFLRAFREAHG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCC TGYRFVGVEIDPHALDLPPWAEGVVADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVL CCEEEEEEEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCHHHHH REVKGLYKKTLSTWKGKYNLYGAFIEKSVRLLREGGTLVFVVPATWLVLDDFSLLRSFLA HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHH REGRTEVYYLGEVFPGRKVSAVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEI CCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCE IRFETGWTREMEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGW EEEECCCCEECCCCCCCCCCEEEEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCE IDYESNHSGLWMPKERAKELRDFYATPHLVVAHTKGTKVVAAWDEKAYPWREEFHLLPKE EEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCHHHHCCCCCC GVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLERIPALLPRKGNTERRKHGPYT CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC SPESAGSF CCCCCCCC >Mature Secondary Structure MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGPFLRAFREAHG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCC TGYRFVGVEIDPHALDLPPWAEGVVADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVL CCEEEEEEEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCHHHHH REVKGLYKKTLSTWKGKYNLYGAFIEKSVRLLREGGTLVFVVPATWLVLDDFSLLRSFLA HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHH REGRTEVYYLGEVFPGRKVSAVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEI CCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCE IRFETGWTREMEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGW EEEECCCCEECCCCCCCCCCEEEEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCE IDYESNHSGLWMPKERAKELRDFYATPHLVVAHTKGTKVVAAWDEKAYPWREEFHLLPKE EEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCHHHHCCCCCC GVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLERIPALLPRKGNTERRKHGPYT CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC SPESAGSF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1339363