| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981544
Identifier: 55981544
GI number: 55981544
Start: 1497723
End: 1498250
Strand: Reverse
Name: 55981544
Synonym: TTHA1575
Alternate gene names: NA
Gene position: 1498250-1497723 (Counterclockwise)
Preceding gene: 55981545
Following gene: 55981543
Centisome position: 81.0
GC content: 68.56
Gene sequence:
>528_bases GTGGAATGGCCCCGCTTCGGCCGCGTGGTCCTCAAGCCCTTCTCCGCCGGGCTTTCCGAGGCGGAGTGGAAGGGCCTCTA CGAGACCTTCCGCGACCCCGAGGTGGCGGAGTGGAACGGCTCAAGCCCCCTGCGCTCGCCTTTTTGGCTCTTCAAGCGCT TCGTCCTGGCGGAGGCCCGGAGAAAGGACCGCGTGGCCTTCGTCATCCTGGACGAGAAGGGGGAGTATTTGGGGACGCTG GAGCTTTACGACCTCACCCCCGAGGAGGCCACCTTGGGCATCCTCATCGGGAGGAAGGACCGCTGGGGGCAGGGCTACGG CACCGAGGCGGTGCGGGCGGCTTTGGACTACGCCTTCCGCGTCCTGGGCCTGAGGCGGGTGAAGCTCAGGACCTTCGCCC ACAACCTCCGCGCCCGGCGGGCCTTTCAGAAGGCGGGTTTCCGCGAGGTGGGCGTGGTGCCGGGCCCCAGGGGGAGGGAG GACGTGCACATGGAGGTGCGCCGTGAGGATCTTGGCCCCGAGGCTTAG
Upstream 100 bases:
>100_bases GGAGAAGAAGATCCCCTTGCGCACCGCCGCCTACGTGGTGGCGGCGACCCGGGTCCTCGAGGCCCAGGCCCTCCGGGGCC TATACCCTTAGGCTATCCCC
Downstream 100 bases:
>100_bases GGAGGAGGTGTGGGCCGCCCTGCCCGAGGGGGTGGAGGTGCGCTTTCTGGACGAGCCCTGGCCCAAGGCCTGCGACCTCT TCATCCCCCCTTACGGGCAG
Product: kanamycin resistance protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Kanamycin Resistance Protein-Related Protein; Gcn5-Related N-Acetyltransferase; Gcn5-Like N-Acetyltransferase; Acetyltransferase Ribosomal Protein N-Acetylase; N-Acetyltransferase Gnat Family; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MEWPRFGRVVLKPFSAGLSEAEWKGLYETFRDPEVAEWNGSSPLRSPFWLFKRFVLAEARRKDRVAFVILDEKGEYLGTL ELYDLTPEEATLGILIGRKDRWGQGYGTEAVRAALDYAFRVLGLRRVKLRTFAHNLRARRAFQKAGFREVGVVPGPRGRE DVHMEVRREDLGPEA
Sequences:
>Translated_175_residues MEWPRFGRVVLKPFSAGLSEAEWKGLYETFRDPEVAEWNGSSPLRSPFWLFKRFVLAEARRKDRVAFVILDEKGEYLGTL ELYDLTPEEATLGILIGRKDRWGQGYGTEAVRAALDYAFRVLGLRRVKLRTFAHNLRARRAFQKAGFREVGVVPGPRGRE DVHMEVRREDLGPEA >Mature_175_residues MEWPRFGRVVLKPFSAGLSEAEWKGLYETFRDPEVAEWNGSSPLRSPFWLFKRFVLAEARRKDRVAFVILDEKGEYLGTL ELYDLTPEEATLGILIGRKDRWGQGYGTEAVRAALDYAFRVLGLRRVKLRTFAHNLRARRAFQKAGFREVGVVPGPRGRE DVHMEVRREDLGPEA
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20168; Mature: 20168
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWPRFGRVVLKPFSAGLSEAEWKGLYETFRDPEVAEWNGSSPLRSPFWLFKRFVLAEAR CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RKDRVAFVILDEKGEYLGTLELYDLTPEEATLGILIGRKDRWGQGYGTEAVRAALDYAFR CCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VLGLRRVKLRTFAHNLRARRAFQKAGFREVGVVPGPRGREDVHMEVRREDLGPEA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MEWPRFGRVVLKPFSAGLSEAEWKGLYETFRDPEVAEWNGSSPLRSPFWLFKRFVLAEAR CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RKDRVAFVILDEKGEYLGTLELYDLTPEEATLGILIGRKDRWGQGYGTEAVRAALDYAFR CCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VLGLRRVKLRTFAHNLRARRAFQKAGFREVGVVPGPRGREDVHMEVRREDLGPEA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA