| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981535
Identifier: 55981535
GI number: 55981535
Start: 1489168
End: 1490622
Strand: Reverse
Name: 55981535
Synonym: TTHA1566
Alternate gene names: NA
Gene position: 1490622-1489168 (Counterclockwise)
Preceding gene: 55981536
Following gene: 55981534
Centisome position: 80.59
GC content: 73.4
Gene sequence:
>1455_bases ATGGAAGCCGCCTGTCTGGTCCGCAGCCTGGGCCTGCCGCAGGGGGAGGAGGCCCTGAAGGCCCGCCTCCGCCGCCCGGG CCACCCCCGGTTGCGGGAGGCCCTCGCCGCCTACCTGAAGCGCCTTCAGGCCCCCGAGGAGGCCTTCCGGGCCCTGGAGC GCCTCGAGGTGGGGGCGGTGGTCACGGGGCAGCAGGCGGGGCTTCTCGGTGGGCCCGCCCTCACCTTCTACAAGGCCCAC ACCGCCCTCTGCCTCGCCGACCGGGCGGGGGCGGCCGGGGTGTTCTGGGTGGCCTCCCAGGACCACGACGTGGAGGAGGT GCGCCACCTCCACCTGCTCCGGGACGAGGTGCCGGAGACCCTCTCCCTGGACCTCCCCCCTTTGCCCTCGGGCAGGATCC CCCTGGCCCCTCACCGCGAGCGCCTCCGCGCCTTCTTGGGGCCTTGGGCCAAGGACTACCGCCTGGGCTACGCCCTGGAG GCGGAGACGCTTTCCGAGTTCTTCGCCCGCGTCCTCCTCGCCTTTCTCGGGGAGCGGGGGCTTGTGCCCTTTGACCCCAT GGCGGAGGAGCTCGCCCCCCTCTTCCTCGAGGCCCTGGAGCGGGAGCTTTCCGACCCCTTGGGGAGCGCCGAGGCCATCA ACCGGGAGGCGGAAAGGATCCGGGCCCTTGGGGGGAAGCCTCCCCTTAGGCGCAAGCCCGGGGCCACCAACCTCTTCCTG GAGACGGACCAAAGGCGCCTTCTCTTCTACGAGGGCGGGGCCTTCACCGACGGGGTGCGGCGGTACACGGCCAAGGAGCT TTGGGAGATCGCCCGGGCCGACCCCTCCCGCCTGACCCCGGCGGCGGGGCTCAGGCCCGTCTTCCAGGACCTGGTCCTGC CCACGGCGGGCTTCGTGGTGGGGCCCAACGAGCTCCGCTACGTGGCCGAGCTCTCCGGGGTCTACGCCCGCTACGGCCTC GCCATGCCCGCCCTCTTCCTGCGGGCCTTCGGGGTGGTGGTGGAGCCGCCCGTCCGGCGCATCCTGGAGAAGTACCGCCT GGACCCCTGGGCCTTCGTGGACGAGGGGGAGGCGGCCTTCCTCCGGGCGGCGGAGGCCTGGCTGGCCCCTTTTCGCGCCT TCCGGGACCGGGTGGAGGGGCTTTTGCAGGAGGCCTCCCGGCTTGTGGAGGAGGCGGAGGCCCTGGAGCCCAACCTCGTC CGGCCCCTCCGGCGTTTCCGGGCCCGGGTTGGGGGGGAGGCGGAGCGGCTTAGGCGGAAGCTCCTCGCGGCCCAGGCGGC CCGGGACGAGGTCCTCGCCCGCCACCTCGGGCGGCTTAAGGTCCACCTCCTCCCCTTTGGGCTTCCCCAGGAGCGGGTCT ACCCCTACGCCATGTACGCCCTGCGCCACGGGGAGGCCCTGAGGCGCCTGGCCGAGGCCCCCTGGGAGGGGAGGGTGGCC CTTTACCTCGGCTGA
Upstream 100 bases:
>100_bases TGGGCGCTGAAAGGGTGGGTGGACCTGGGCTACCGCAGGGTGGAGGTCCTGGAGCCCAAGGCCCTTGCCCGCCTTGCCGA GGAACTTTAGGCTTTAAAGC
Downstream 100 bases:
>100_bases GGAAGGGTTAGGATGTTCGGCGAAAGGAGGCGGGGTTGAAGCGGCTTTGGGCGTGGGTAGGGCTATTGGCCTTGGTCCTG GCGGCGCTGGGGCAGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MEAACLVRSLGLPQGEEALKARLRRPGHPRLREALAAYLKRLQAPEEAFRALERLEVGAVVTGQQAGLLGGPALTFYKAH TALCLADRAGAAGVFWVASQDHDVEEVRHLHLLRDEVPETLSLDLPPLPSGRIPLAPHRERLRAFLGPWAKDYRLGYALE AETLSEFFARVLLAFLGERGLVPFDPMAEELAPLFLEALERELSDPLGSAEAINREAERIRALGGKPPLRRKPGATNLFL ETDQRRLLFYEGGAFTDGVRRYTAKELWEIARADPSRLTPAAGLRPVFQDLVLPTAGFVVGPNELRYVAELSGVYARYGL AMPALFLRAFGVVVEPPVRRILEKYRLDPWAFVDEGEAAFLRAAEAWLAPFRAFRDRVEGLLQEASRLVEEAEALEPNLV RPLRRFRARVGGEAERLRRKLLAAQAARDEVLARHLGRLKVHLLPFGLPQERVYPYAMYALRHGEALRRLAEAPWEGRVA LYLG
Sequences:
>Translated_484_residues MEAACLVRSLGLPQGEEALKARLRRPGHPRLREALAAYLKRLQAPEEAFRALERLEVGAVVTGQQAGLLGGPALTFYKAH TALCLADRAGAAGVFWVASQDHDVEEVRHLHLLRDEVPETLSLDLPPLPSGRIPLAPHRERLRAFLGPWAKDYRLGYALE AETLSEFFARVLLAFLGERGLVPFDPMAEELAPLFLEALERELSDPLGSAEAINREAERIRALGGKPPLRRKPGATNLFL ETDQRRLLFYEGGAFTDGVRRYTAKELWEIARADPSRLTPAAGLRPVFQDLVLPTAGFVVGPNELRYVAELSGVYARYGL AMPALFLRAFGVVVEPPVRRILEKYRLDPWAFVDEGEAAFLRAAEAWLAPFRAFRDRVEGLLQEASRLVEEAEALEPNLV RPLRRFRARVGGEAERLRRKLLAAQAARDEVLARHLGRLKVHLLPFGLPQERVYPYAMYALRHGEALRRLAEAPWEGRVA LYLG >Mature_484_residues MEAACLVRSLGLPQGEEALKARLRRPGHPRLREALAAYLKRLQAPEEAFRALERLEVGAVVTGQQAGLLGGPALTFYKAH TALCLADRAGAAGVFWVASQDHDVEEVRHLHLLRDEVPETLSLDLPPLPSGRIPLAPHRERLRAFLGPWAKDYRLGYALE AETLSEFFARVLLAFLGERGLVPFDPMAEELAPLFLEALERELSDPLGSAEAINREAERIRALGGKPPLRRKPGATNLFL ETDQRRLLFYEGGAFTDGVRRYTAKELWEIARADPSRLTPAAGLRPVFQDLVLPTAGFVVGPNELRYVAELSGVYARYGL AMPALFLRAFGVVVEPPVRRILEKYRLDPWAFVDEGEAAFLRAAEAWLAPFRAFRDRVEGLLQEASRLVEEAEALEPNLV RPLRRFRARVGGEAERLRRKLLAAQAARDEVLARHLGRLKVHLLPFGLPQERVYPYAMYALRHGEALRRLAEAPWEGRVA LYLG
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011199 [H]
Pfam domain/function: PF10079 DUF2317 [H]
EC number: NA
Molecular weight: Translated: 54144; Mature: 54144
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAACLVRSLGLPQGEEALKARLRRPGHPRLREALAAYLKRLQAPEEAFRALERLEVGAV CCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE VTGQQAGLLGGPALTFYKAHTALCLADRAGAAGVFWVASQDHDVEEVRHLHLLRDEVPET EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC LSLDLPPLPSGRIPLAPHRERLRAFLGPWAKDYRLGYALEAETLSEFFARVLLAFLGERG EECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCEEECHHHHHHHHHHHHHHHHCCCC LVPFDPMAEELAPLFLEALERELSDPLGSAEAINREAERIRALGGKPPLRRKPGATNLFL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE ETDQRRLLFYEGGAFTDGVRRYTAKELWEIARADPSRLTPAAGLRPVFQDLVLPTAGFVV ECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEE GPNELRYVAELSGVYARYGLAMPALFLRAFGVVVEPPVRRILEKYRLDPWAFVDEGEAAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHH LRAAEAWLAPFRAFRDRVEGLLQEASRLVEEAEALEPNLVRPLRRFRARVGGEAERLRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH LLAAQAARDEVLARHLGRLKVHLLPFGLPQERVYPYAMYALRHGEALRRLAEAPWEGRVA HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LYLG EEEC >Mature Secondary Structure MEAACLVRSLGLPQGEEALKARLRRPGHPRLREALAAYLKRLQAPEEAFRALERLEVGAV CCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE VTGQQAGLLGGPALTFYKAHTALCLADRAGAAGVFWVASQDHDVEEVRHLHLLRDEVPET EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCC LSLDLPPLPSGRIPLAPHRERLRAFLGPWAKDYRLGYALEAETLSEFFARVLLAFLGERG EECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCEEECHHHHHHHHHHHHHHHHCCCC LVPFDPMAEELAPLFLEALERELSDPLGSAEAINREAERIRALGGKPPLRRKPGATNLFL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE ETDQRRLLFYEGGAFTDGVRRYTAKELWEIARADPSRLTPAAGLRPVFQDLVLPTAGFVV ECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEE GPNELRYVAELSGVYARYGLAMPALFLRAFGVVVEPPVRRILEKYRLDPWAFVDEGEAAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCHHHH LRAAEAWLAPFRAFRDRVEGLLQEASRLVEEAEALEPNLVRPLRRFRARVGGEAERLRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH LLAAQAARDEVLARHLGRLKVHLLPFGLPQERVYPYAMYALRHGEALRRLAEAPWEGRVA HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LYLG EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA