| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yjjG [C]
Identifier: 55981487
GI number: 55981487
Start: 1442130
End: 1442843
Strand: Direct
Name: yjjG [C]
Synonym: TTHA1518
Alternate gene names: 55981487
Gene position: 1442130-1442843 (Clockwise)
Preceding gene: 55981486
Following gene: 55981488
Centisome position: 77.96
GC content: 68.77
Gene sequence:
>714_bases ATGAAACCCAAAGCCATCACCTTTGACTTCTGGGGCACCCTCTTCACCGAGGGGGAGGCGTTTTTGGAAAAGGTCATGCC CGCCCGGTACGAGATCCTTCTGGACGCCCTCTCCGAGGCGGGGCACCCCGTGGACGAGGCCGAGGTGCGGGAGGCCTACC GCCAGGCCTCCTTGGCCTTTGAGGAGGCCTGGAAGGCGGGGGAGCACATGCCCGTCTACGAACGGGTGGCCCGGATCTTC GCCCTCCTCGGCGCCCCCCACGACCCCGGGCTCATCGCCCTCACCGCAAGGCGCCTGGAGGAAAGCTCCCTCCTCGCCCC CCTCAAGCCCCTCCCCGGGGTGGAGGTCCTGAAGGACCTCGCCAAGAAGTACCCCCTGGCCATCGTCTCCGACACCGGCA TGACCCCGGGCCGCCTCCTCAGGGAGCACCTGAAGCGGCAGGGCCTGGACGTCTTCCAGGCCTTTAGCTTCTCCGACGAG ACGGGCTTCGTGAAGCCCAAGCCCGAGGCCTTTCGCGTGGCCCTCGAGGCCCTGGGCGTCGCCCCGGAGGAGGCCCTGCA CGTGGGGGACCTGCCCCAGACGGACATCAAGGGGGCCTTCGGGACGGGCTACCCCTGGGCGGTCCAGTACGTGGGCCTGA GGGAGGTGAACGGGGAGGTGAGGCCCACGGCCAAGGTGAAGGACCACCGGGAGCTCCTCTCCCTCCTCACGTGA
Upstream 100 bases:
>100_bases TCCTCGGCATGATGCCCCATCCCGAAAGGGCCGTGGACGAGGTCTTGGGCAACACCGACGGGCTTCCCTTCTTCCTGGGG CTCGTCAAGGAGGTGGCACG
Downstream 100 bases:
>100_bases TGGAGGCCCTCGCCAAGGAGATCGGGATCCCGGAAGGGGAGTACCGGGAGATCGTCCAGAGGCTCGGGCGGGAGCCGAAC CGGGTGGAGCTCCTCCTCTT
Product: 2-haloalkanoic acid dehalogenase-like protein
Products: NA
Alternate protein names: 2-Haloalkanoic Acid Dehalogenase; 2-Haloalkanoic Acid Dehalogenase-Related Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase; Hydrolase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT
Sequences:
>Translated_237_residues MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT >Mature_237_residues MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26218; Mature: 26218
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAF CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEAWKAGEHMPVYERVARIFALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDL HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHH AKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDETGFVKPKPEAFRVALEALGV HHHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC APEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT CHHHHHHCCCCCCHHCCCCCCCCCCHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAF CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEAWKAGEHMPVYERVARIFALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDL HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHH AKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDETGFVKPKPEAFRVALEALGV HHHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC APEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT CHHHHHHCCCCCCHHCCCCCCCCCCHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA