Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is yjjG [C]

Identifier: 55981487

GI number: 55981487

Start: 1442130

End: 1442843

Strand: Direct

Name: yjjG [C]

Synonym: TTHA1518

Alternate gene names: 55981487

Gene position: 1442130-1442843 (Clockwise)

Preceding gene: 55981486

Following gene: 55981488

Centisome position: 77.96

GC content: 68.77

Gene sequence:

>714_bases
ATGAAACCCAAAGCCATCACCTTTGACTTCTGGGGCACCCTCTTCACCGAGGGGGAGGCGTTTTTGGAAAAGGTCATGCC
CGCCCGGTACGAGATCCTTCTGGACGCCCTCTCCGAGGCGGGGCACCCCGTGGACGAGGCCGAGGTGCGGGAGGCCTACC
GCCAGGCCTCCTTGGCCTTTGAGGAGGCCTGGAAGGCGGGGGAGCACATGCCCGTCTACGAACGGGTGGCCCGGATCTTC
GCCCTCCTCGGCGCCCCCCACGACCCCGGGCTCATCGCCCTCACCGCAAGGCGCCTGGAGGAAAGCTCCCTCCTCGCCCC
CCTCAAGCCCCTCCCCGGGGTGGAGGTCCTGAAGGACCTCGCCAAGAAGTACCCCCTGGCCATCGTCTCCGACACCGGCA
TGACCCCGGGCCGCCTCCTCAGGGAGCACCTGAAGCGGCAGGGCCTGGACGTCTTCCAGGCCTTTAGCTTCTCCGACGAG
ACGGGCTTCGTGAAGCCCAAGCCCGAGGCCTTTCGCGTGGCCCTCGAGGCCCTGGGCGTCGCCCCGGAGGAGGCCCTGCA
CGTGGGGGACCTGCCCCAGACGGACATCAAGGGGGCCTTCGGGACGGGCTACCCCTGGGCGGTCCAGTACGTGGGCCTGA
GGGAGGTGAACGGGGAGGTGAGGCCCACGGCCAAGGTGAAGGACCACCGGGAGCTCCTCTCCCTCCTCACGTGA

Upstream 100 bases:

>100_bases
TCCTCGGCATGATGCCCCATCCCGAAAGGGCCGTGGACGAGGTCTTGGGCAACACCGACGGGCTTCCCTTCTTCCTGGGG
CTCGTCAAGGAGGTGGCACG

Downstream 100 bases:

>100_bases
TGGAGGCCCTCGCCAAGGAGATCGGGATCCCGGAAGGGGAGTACCGGGAGATCGTCCAGAGGCTCGGGCGGGAGCCGAAC
CGGGTGGAGCTCCTCCTCTT

Product: 2-haloalkanoic acid dehalogenase-like protein

Products: NA

Alternate protein names: 2-Haloalkanoic Acid Dehalogenase; 2-Haloalkanoic Acid Dehalogenase-Related Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase; Hydrolase

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF
ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE
TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT

Sequences:

>Translated_237_residues
MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF
ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE
TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT
>Mature_237_residues
MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAFEEAWKAGEHMPVYERVARIF
ALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDLAKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDE
TGFVKPKPEAFRVALEALGVAPEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26218; Mature: 26218

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAF
CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EEAWKAGEHMPVYERVARIFALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDL
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHH
AKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDETGFVKPKPEAFRVALEALGV
HHHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
APEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT
CHHHHHHCCCCCCHHCCCCCCCCCCHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKPKAITFDFWGTLFTEGEAFLEKVMPARYEILLDALSEAGHPVDEAEVREAYRQASLAF
CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EEAWKAGEHMPVYERVARIFALLGAPHDPGLIALTARRLEESSLLAPLKPLPGVEVLKDL
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHH
AKKYPLAIVSDTGMTPGRLLREHLKRQGLDVFQAFSFSDETGFVKPKPEAFRVALEALGV
HHHCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
APEEALHVGDLPQTDIKGAFGTGYPWAVQYVGLREVNGEVRPTAKVKDHRELLSLLT
CHHHHHHCCCCCCHHCCCCCCCCCCHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA