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The map label for this gene is 55981370

Identifier: 55981370

GI number: 55981370

Start: 1334333

End: 1335313

Strand: Reverse

Name: 55981370

Synonym: TTHA1401

Alternate gene names: NA

Gene position: 1335313-1334333 (Counterclockwise)

Preceding gene: 55981371

Following gene: 55981369

Centisome position: 72.19

GC content: 68.6

Gene sequence:

>981_bases
ATGATGGCCACCCTGTTCTTCCTCGCCCTCTTTCTCCTCGGCCTCCTCCTCGCCCTAAGGCCCCTCCTCGGCCCCAAGGA
GCCCTTCCCCGAGCCCCCAAGGCGGGAGGAGCTCCTTAGGGAGCTAGAGGTCCTCAAGGAGGAGGTGGAGGCCCTAGAGG
GAGAGGAAAAGAAGCGGGCCCTCGCCCGCATGGTGGAGGTGGAAAGGCTTTTGGAGGGCTACCGTCCTCCCGCCCCCCGG
CCCTTCCGCCCCTGGCCCGTGGCCCTGGTCCTGGGGGCCGTGGTCCTCCTCGGGGTGGGCCTTTGGCGCTACACCCTGCC
CCGCCTGCCCGGGGAGACCACCGTGACCCAGCGCCAGGAAGCCCGGGAGCTCAAAGCCCTCGCCGACAAGGCCAGGCGCA
CGGGAGAGGTGGAGGACCTCCTCGCCTGGGGCCGCAGGGCCTACGAGCTCCAGGCCTTTGACCAGGCGGCGGAGGCCTAC
CTGGAGGTCCTGAAGAAAGACCCCAAGAACGTGGAGGCGGTGCGCCGGGTGGGGATCCTCCTCTTCATGGGGGGGAGGCC
CGAGGAGGCGAGGATTTTCCTGGAAATCGCCCAGGGCGCCGACCCCGAGGCCGCCGAAGGGTGGCTTTTCCTGGGGAACC
TCTACTTCCAGGAAGGGCGGATGCAGGAGGCCATCGCCGCCTGGGAGAAGTACCTGGAGGCCGGGGGCGAGGCCAAAGAG
CGGGTGGAGGCCCTCATCGCCATGGCCAAAGCCCAAGCCCAAGGGGGAAAGGACGGGAGGAGCGTCTACGAAGCCCGTTG
CGCTGCCTGCCACGGCCTTCAGGGGGAAGGGGGCGTGGGCCCAAGGCTTAAGGGGAACCCCATCCTGAAGGTGCCTGAAG
CGGTGCGGGAGATCGTCCTCCAGGGCCGGGGGACGATGCCCGCCGTTCCCCTTTCCGAGGAGGAGCTTGAGGCCCTTTTG
GGCTACCTGGGAAGCCTCTAG

Upstream 100 bases:

>100_bases
TTCTCCTCCTCGGCCTCGGCCTCTTCGCCTACTTCCGGCCCAAGCCGCTTCCCAAGGAGCTCTTGGAGGAGGCGGAGCGC
CGCCTTAAGGAGCCCCCGAG

Downstream 100 bases:

>100_bases
CCATGAAGCGGCGCGACCTCGTCTTCTACCTTCCCGTGGCGGTGGCCGGGGGGTTTTTCGCCTGGTTCGGGGTGCGCACC
TACAACCTCCGCTTCCGTCC

Product: cytochrome C family protein

Products: NA

Alternate protein names: Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat-Containing Protein; Cytochrome C Class I

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MMATLFFLALFLLGLLLALRPLLGPKEPFPEPPRREELLRELEVLKEEVEALEGEEKKRALARMVEVERLLEGYRPPAPR
PFRPWPVALVLGAVVLLGVGLWRYTLPRLPGETTVTQRQEARELKALADKARRTGEVEDLLAWGRRAYELQAFDQAAEAY
LEVLKKDPKNVEAVRRVGILLFMGGRPEEARIFLEIAQGADPEAAEGWLFLGNLYFQEGRMQEAIAAWEKYLEAGGEAKE
RVEALIAMAKAQAQGGKDGRSVYEARCAACHGLQGEGGVGPRLKGNPILKVPEAVREIVLQGRGTMPAVPLSEEELEALL
GYLGSL

Sequences:

>Translated_326_residues
MMATLFFLALFLLGLLLALRPLLGPKEPFPEPPRREELLRELEVLKEEVEALEGEEKKRALARMVEVERLLEGYRPPAPR
PFRPWPVALVLGAVVLLGVGLWRYTLPRLPGETTVTQRQEARELKALADKARRTGEVEDLLAWGRRAYELQAFDQAAEAY
LEVLKKDPKNVEAVRRVGILLFMGGRPEEARIFLEIAQGADPEAAEGWLFLGNLYFQEGRMQEAIAAWEKYLEAGGEAKE
RVEALIAMAKAQAQGGKDGRSVYEARCAACHGLQGEGGVGPRLKGNPILKVPEAVREIVLQGRGTMPAVPLSEEELEALL
GYLGSL
>Mature_326_residues
MMATLFFLALFLLGLLLALRPLLGPKEPFPEPPRREELLRELEVLKEEVEALEGEEKKRALARMVEVERLLEGYRPPAPR
PFRPWPVALVLGAVVLLGVGLWRYTLPRLPGETTVTQRQEARELKALADKARRTGEVEDLLAWGRRAYELQAFDQAAEAY
LEVLKKDPKNVEAVRRVGILLFMGGRPEEARIFLEIAQGADPEAAEGWLFLGNLYFQEGRMQEAIAAWEKYLEAGGEAKE
RVEALIAMAKAQAQGGKDGRSVYEARCAACHGLQGEGGVGPRLKGNPILKVPEAVREIVLQGRGTMPAVPLSEEELEALL
GYLGSL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36154; Mature: 36154

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMATLFFLALFLLGLLLALRPLLGPKEPFPEPPRREELLRELEVLKEEVEALEGEEKKRA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
LARMVEVERLLEGYRPPAPRPFRPWPVALVLGAVVLLGVGLWRYTLPRLPGETTVTQRQE
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARELKALADKARRTGEVEDLLAWGRRAYELQAFDQAAEAYLEVLKKDPKNVEAVRRVGIL
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LFMGGRPEEARIFLEIAQGADPEAAEGWLFLGNLYFQEGRMQEAIAAWEKYLEAGGEAKE
EEECCCCCHHHHHEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RVEALIAMAKAQAQGGKDGRSVYEARCAACHGLQGEGGVGPRLKGNPILKVPEAVREIVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
QGRGTMPAVPLSEEELEALLGYLGSL
HCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMATLFFLALFLLGLLLALRPLLGPKEPFPEPPRREELLRELEVLKEEVEALEGEEKKRA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
LARMVEVERLLEGYRPPAPRPFRPWPVALVLGAVVLLGVGLWRYTLPRLPGETTVTQRQE
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARELKALADKARRTGEVEDLLAWGRRAYELQAFDQAAEAYLEVLKKDPKNVEAVRRVGIL
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LFMGGRPEEARIFLEIAQGADPEAAEGWLFLGNLYFQEGRMQEAIAAWEKYLEAGGEAKE
EEECCCCCHHHHHEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RVEALIAMAKAQAQGGKDGRSVYEARCAACHGLQGEGGVGPRLKGNPILKVPEAVREIVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHH
QGRGTMPAVPLSEEELEALLGYLGSL
HCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA