| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is aroK [H]
Identifier: 55981354
GI number: 55981354
Start: 1322023
End: 1322577
Strand: Direct
Name: aroK [H]
Synonym: TTHA1385
Alternate gene names: 55981354
Gene position: 1322023-1322577 (Clockwise)
Preceding gene: 55981353
Following gene: 55981355
Centisome position: 71.47
GC content: 67.39
Gene sequence:
>555_bases ATGGCCCGCCTCGAGGTTCCCCGTCCCGCCACCTTCGTCACCCTCACCGGGTTCATGGGGGTGGGGAAAAGCCGCATCGG GCGGGAGCTCGCCCGGGCGCTCATGCTCCACTTCATTGACCTGGACCGCTACATTGAGCGGCGCACCGGGATCTCCATCC CCGACATCTTCCGCCACCTCGGGGAGGAGGCCTTCCGCAGGATGGAGAAGGAAGCGGTGCGGGAGCTCGTGGGAAAGGAC TACCTGGTCCTCTCCCTGGGCGGGGGAACCTTCATGGACCCGGAAAGCCAAAAGGCCCTCCTCGGCCGCGGGCCCGTGGT GGCCCTATGGGCGAGCCCCGAGACCATCCTGGAAAGGGCCATGCGCAAGCCCGGGGAAAGGCCCCTCCTCCAGGTGGAAA ACCCCCTGGAGAGGATCCGGACCCTCCTCGAGGCCCGGGCCCCCGTCTACCGCAAGGCCCACATCCACGTCTCCACCGAC GGGCGTCGCGTGGAGGAAGTGGTGGAGGAGATCGTAGAGAAGCTCTGGCGCCATGCAGAGGCTAGAGGTGCGTGA
Upstream 100 bases:
>100_bases GAAGTTCGGGGGGGACACCATGGAGGAGATCCAGGAACGGGTGGAGCGCTACCGGGAGCGGGTGCGGGCCTACTGAGCCC GGCCCAGGTAGGATGGGAGG
Downstream 100 bases:
>100_bases ACCCGTCCCCTACCCCATCCTCGTGGGGGAAGGGGTCCTGAAGGAGGTCCCCCCGCTTGCGGGCCCCGCCGCCCTCCTCT TTGACCGGAGGGTGGAGGGC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MARLEVPRPATFVTLTGFMGVGKSRIGRELARALMLHFIDLDRYIERRTGISIPDIFRHLGEEAFRRMEKEAVRELVGKD YLVLSLGGGTFMDPESQKALLGRGPVVALWASPETILERAMRKPGERPLLQVENPLERIRTLLEARAPVYRKAHIHVSTD GRRVEEVVEEIVEKLWRHAEARGA
Sequences:
>Translated_184_residues MARLEVPRPATFVTLTGFMGVGKSRIGRELARALMLHFIDLDRYIERRTGISIPDIFRHLGEEAFRRMEKEAVRELVGKD YLVLSLGGGTFMDPESQKALLGRGPVVALWASPETILERAMRKPGERPLLQVENPLERIRTLLEARAPVYRKAHIHVSTD GRRVEEVVEEIVEKLWRHAEARGA >Mature_183_residues ARLEVPRPATFVTLTGFMGVGKSRIGRELARALMLHFIDLDRYIERRTGISIPDIFRHLGEEAFRRMEKEAVRELVGKDY LVLSLGGGTFMDPESQKALLGRGPVVALWASPETILERAMRKPGERPLLQVENPLERIRTLLEARAPVYRKAHIHVSTDG RRVEEVVEEIVEKLWRHAEARGA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=165, Percent_Identity=39.3939393939394, Blast_Score=101, Evalue=2e-23,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20945; Mature: 20814
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLEVPRPATFVTLTGFMGVGKSRIGRELARALMLHFIDLDRYIERRTGISIPDIFRHL CCCCCCCCCCHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GEEAFRRMEKEAVRELVGKDYLVLSLGGGTFMDPESQKALLGRGPVVALWASPETILERA HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHH MRKPGERPLLQVENPLERIRTLLEARAPVYRKAHIHVSTDGRRVEEVVEEIVEKLWRHAE HHCCCCCCCEECCCHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHH ARGA CCCC >Mature Secondary Structure ARLEVPRPATFVTLTGFMGVGKSRIGRELARALMLHFIDLDRYIERRTGISIPDIFRHL CCCCCCCCCHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GEEAFRRMEKEAVRELVGKDYLVLSLGGGTFMDPESQKALLGRGPVVALWASPETILERA HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHH MRKPGERPLLQVENPLERIRTLLEARAPVYRKAHIHVSTDGRRVEEVVEEIVEKLWRHAE HHCCCCCCCEECCCHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHH ARGA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA