Click here to switch to the map view.

The map label for this gene is ylbK [H]

Identifier: 55981338

GI number: 55981338

Start: 1306178

End: 1306933

Strand: Reverse

Name: ylbK [H]

Synonym: TTHA1369

Alternate gene names: 55981338

Gene position: 1306933-1306178 (Counterclockwise)

Preceding gene: 55981341

Following gene: 55981337

Centisome position: 70.65

GC content: 70.37

Gene sequence:

>756_bases
ATGCGCGGCCTCGTGCTTTCCGGAGGCGGGGCGAGGGGGTTCGCCCACATCGGCGCCCTGGAGGTCTTCGTGGAGGCGGG
GCTGGACTTTGAGGTGGTGGCCGGGGCGAGCATGGGGGCCATCGTGGGGGCGCTTTTCGCCGCGGGAAGAAGCCCTCAGG
AGATCCTGGAGATCGCCCGGAACACCCCCTGGCTCGGGATTTTGGGCTTCTCCTTTCGGGAGGCCCTCTTCTCCCGGGGG
CGGCTCAGGCGGTACCTCGCCGAGCACCTGCCCCAGGATTTCGCCGACCTCAAGCGCAGGCTCGTGGTCACGGCGGTGGA
GGTGCGGAGCGGGCGGGTGGTCTACCTCTTCCAGGGCGACCTGGTGAGCGCGGTCTTGGCCTCGGCGGCCCACCCCCTCC
TCCTCAGGCCGGTGCGGCGGGAGGGCCTCCTCCTCTTTGACGGCGGGGTCCTGGACAACCTGCCCGTGGACGCGGCCAGG
TTCTTGGGGGCGGAGGAGGTCTGGGCCGTGGACGTGACCCCGGAGCGGAGCGTGGAAAAGCCCCCCGAGGGGGTTTTGGG
CCTCGCCCTCAGGGCGGTGGACCTGATGCAGCACCACCTCACGGCAAGCCGCATGGCCCTCTACGCCCCCGAGGTCTACC
TGAGGCCCGAGCTCGGGGAGGTTGCGGTGCAGGACTTCCTCCGCCTCGAGGAGGCGGTGGAGGCGGGCAGGAAGGCGGCC
AAGCGCTTTCTGGAGAGTAGAGTGGGGGAGGTATGA

Upstream 100 bases:

>100_bases
GGGCCAGGGGCCGCACCACCCGGTAGCGGCCCGAGAGGGTTTTGCCCACCAGGCTCACCGCCCCCACTATACCCTCAGAA
AACCCGGGTACCATGGGCCC

Downstream 100 bases:

>100_bases
AGGCCTTTTGGGACTACTTGTTCAAGGAGTGGTTCCGCCAGGTGGGGGAGGCCCTCCTGGTGGCCTTTTTGGTCACCACC
TTCGTCTTCACCACGGTGGG

Product: phospholipase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRGLVLSGGGARGFAHIGALEVFVEAGLDFEVVAGASMGAIVGALFAAGRSPQEILEIARNTPWLGILGFSFREALFSRG
RLRRYLAEHLPQDFADLKRRLVVTAVEVRSGRVVYLFQGDLVSAVLASAAHPLLLRPVRREGLLLFDGGVLDNLPVDAAR
FLGAEEVWAVDVTPERSVEKPPEGVLGLALRAVDLMQHHLTASRMALYAPEVYLRPELGEVAVQDFLRLEEAVEAGRKAA
KRFLESRVGEV

Sequences:

>Translated_251_residues
MRGLVLSGGGARGFAHIGALEVFVEAGLDFEVVAGASMGAIVGALFAAGRSPQEILEIARNTPWLGILGFSFREALFSRG
RLRRYLAEHLPQDFADLKRRLVVTAVEVRSGRVVYLFQGDLVSAVLASAAHPLLLRPVRREGLLLFDGGVLDNLPVDAAR
FLGAEEVWAVDVTPERSVEKPPEGVLGLALRAVDLMQHHLTASRMALYAPEVYLRPELGEVAVQDFLRLEEAVEAGRKAA
KRFLESRVGEV
>Mature_251_residues
MRGLVLSGGGARGFAHIGALEVFVEAGLDFEVVAGASMGAIVGALFAAGRSPQEILEIARNTPWLGILGFSFREALFSRG
RLRRYLAEHLPQDFADLKRRLVVTAVEVRSGRVVYLFQGDLVSAVLASAAHPLLLRPVRREGLLLFDGGVLDNLPVDAAR
FLGAEEVWAVDVTPERSVEKPPEGVLGLALRAVDLMQHHLTASRMALYAPEVYLRPELGEVAVQDFLRLEEAVEAGRKAA
KRFLESRVGEV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=185, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI260656043, Length=185, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI260656041, Length=185, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI116256487, Length=185, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI260656039, Length=185, Percent_Identity=32.4324324324324, Blast_Score=81, Evalue=9e-16,
Organism=Escherichia coli, GI226510936, Length=287, Percent_Identity=26.4808362369338, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 27275; Mature: 27275

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLVLSGGGARGFAHIGALEVFVEAGLDFEVVAGASMGAIVGALFAAGRSPQEILEIAR
CCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHH
NTPWLGILGFSFREALFSRGRLRRYLAEHLPQDFADLKRRLVVTAVEVRSGRVVYLFQGD
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCEEEEECCH
LVSAVLASAAHPLLLRPVRREGLLLFDGGVLDNLPVDAARFLGAEEVWAVDVTPERSVEK
HHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCC
PPEGVLGLALRAVDLMQHHLTASRMALYAPEVYLRPELGEVAVQDFLRLEEAVEAGRKAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KRFLESRVGEV
HHHHHHHHCCC
>Mature Secondary Structure
MRGLVLSGGGARGFAHIGALEVFVEAGLDFEVVAGASMGAIVGALFAAGRSPQEILEIAR
CCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHH
NTPWLGILGFSFREALFSRGRLRRYLAEHLPQDFADLKRRLVVTAVEVRSGRVVYLFQGD
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCEEEEECCH
LVSAVLASAAHPLLLRPVRREGLLLFDGGVLDNLPVDAARFLGAEEVWAVDVTPERSVEK
HHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCC
PPEGVLGLALRAVDLMQHHLTASRMALYAPEVYLRPELGEVAVQDFLRLEEAVEAGRKAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KRFLESRVGEV
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]