Click here to switch to the map view.

The map label for this gene is 55981333

Identifier: 55981333

GI number: 55981333

Start: 1301628

End: 1302641

Strand: Reverse

Name: 55981333

Synonym: TTHA1364

Alternate gene names: NA

Gene position: 1302641-1301628 (Counterclockwise)

Preceding gene: 55981337

Following gene: 55981321

Centisome position: 70.42

GC content: 57.89

Gene sequence:

>1014_bases
ATGGCGCTTTGGTTGGTGCGGGCGGGGAAACGCGGTGAGCAGGAAGAGTTTGCCCTGAATAACAGGGTTGCGGTCATTGG
ATGGGACGACTTGCCCGACCTCTCTCAGGTGCAAACTCGGGAGGAACTTTACAATCTCTTGGAGGAGACCTATCCCGAGA
TTCAACGTAAAGCCCTTCTCAGCTGGCTCAGTCAAATCTGGCCTTTTGTCCGCGAGATGCAGCAGGGCGATTTGGTTGCC
CTGCCCTCCAAGCGGCGGCCCGTCGTTTATTTTGGGCGCGTAAAGGGTCCTTACGTTTACAACCCTAATAACCCTGAAGG
GGCCAAACACACCCGCCCCGTGGAGTGGTTCAAGGAAATACCTCGGGACAGGATTGACAGGGACATCCTCTACTCCCTGG
GGGCGTTTATGACCGTGTGCCGCATTCAGCGCAACAACGCCGAGGAACGCGTCGTGCGCCTCCTCGAGGGCAAGTCCCCC
GAAAAAATCAAGAACGAAGAAAAGAAAGAGGGAGAAGGCTATCCAGCGGACTTGGAGGAGTACGCCCTGGATTTGATCCG
GCAACACATTGCGCGCAAGTTTAAAGGGCACCGCTTGGCTTATCTCGTGGAGGCGATTCTTCAAGCCGAGGGGTACTTCA
CTTACCGTTCTCCCGAGGGACCCGATGGGGGTGTGGACATTCTGGCGGGGCGGGGTCCCCTGGGGTTTGACGAGCCTAGG
CTCGCCGTACAGGTGAAGTCGGGGGATGCTCCCGTGGGTGGCCCCGAGCTCAACCAGCTTCGCGGCGCCATGGGCAAGCT
GAACGCCCGCGTGGGGCTTTTTGTTTCCTGGGGTGGATTTAAGGGGGCCGCCGAGAAGGAGAAGGCGCAGTCCTTCTTTG
AGATAAGGCTTTGGGACGCCAACGACCTCATTCAGGCCCTACTCGCCAACTACGAAAGGCTTCCCGACGATATTCAGGCG
GAAATACCCCTCAAGCGCATTTGGATCCTGCTACCTGGTGAGGAAGAAGGGTGA

Upstream 100 bases:

>100_bases
GCCACGCGCATTTGCGCTCAATATACTTCCATAGGACCCGGTTTGCCTCGGGAGGCTTCGCTTCCCGGCGAAGAGAATAT
CTTGGGGGGAGGTGGGAGGC

Downstream 100 bases:

>100_bases
CGCTTTCTTGGTGAAGGCTCTGAAACGCAGCTTCTTTCTGGACATCCCTCCGGGCCCTCCTTAGGCCTCCTCCTCCAAAA
GGGGCAACCGCACCCTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Restriction Endonuclease; Mrr Restriction Endonuclease; GTPase Subunit Of Restriction Endonuclease; Restriction Endonuclease Protein; Restriction Endonuclease Family Protein; 5-Methylcytosine-Specific Restriction MRR; Mrr Restriction System Protein

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYNLLEETYPEIQRKALLSWLSQIWPFVREMQQGDLVA
LPSKRRPVVYFGRVKGPYVYNPNNPEGAKHTRPVEWFKEIPRDRIDRDILYSLGAFMTVCRIQRNNAEERVVRLLEGKSP
EKIKNEEKKEGEGYPADLEEYALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPR
LAVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDANDLIQALLANYERLPDDIQA
EIPLKRIWILLPGEEEG

Sequences:

>Translated_337_residues
MALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYNLLEETYPEIQRKALLSWLSQIWPFVREMQQGDLVA
LPSKRRPVVYFGRVKGPYVYNPNNPEGAKHTRPVEWFKEIPRDRIDRDILYSLGAFMTVCRIQRNNAEERVVRLLEGKSP
EKIKNEEKKEGEGYPADLEEYALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPR
LAVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDANDLIQALLANYERLPDDIQA
EIPLKRIWILLPGEEEG
>Mature_336_residues
ALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYNLLEETYPEIQRKALLSWLSQIWPFVREMQQGDLVAL
PSKRRPVVYFGRVKGPYVYNPNNPEGAKHTRPVEWFKEIPRDRIDRDILYSLGAFMTVCRIQRNNAEERVVRLLEGKSPE
KIKNEEKKEGEGYPADLEEYALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPRL
AVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDANDLIQALLANYERLPDDIQAE
IPLKRIWILLPGEEEG

Specific function: Unknown

COG id: COG4127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38426; Mature: 38295

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYNLLEETYPEIQRKALL
CEEEEEECCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWLSQIWPFVREMQQGDLVALPSKRRPVVYFGRVKGPYVYNPNNPEGAKHTRPVEWFKEI
HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHC
PRDRIDRDILYSLGAFMTVCRIQRNNAEERVVRLLEGKSPEKIKNEEKKEGEGYPADLEE
CHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCHHH
YALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCC
LAVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDA
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHEEEEEEECH
NDLIQALLANYERLPDDIQAEIPLKRIWILLPGEEEG
HHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
ALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYNLLEETYPEIQRKALL
EEEEEECCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWLSQIWPFVREMQQGDLVALPSKRRPVVYFGRVKGPYVYNPNNPEGAKHTRPVEWFKEI
HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHC
PRDRIDRDILYSLGAFMTVCRIQRNNAEERVVRLLEGKSPEKIKNEEKKEGEGYPADLEE
CHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCHHH
YALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCC
LAVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDA
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHEEEEEEECH
NDLIQALLANYERLPDDIQAEIPLKRIWILLPGEEEG
HHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA