| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is zur [H]
Identifier: 55981261
GI number: 55981261
Start: 1233813
End: 1234181
Strand: Direct
Name: zur [H]
Synonym: TTHA1292
Alternate gene names: 55981261
Gene position: 1233813-1234181 (Clockwise)
Preceding gene: 55981254
Following gene: 55981265
Centisome position: 66.7
GC content: 75.07
Gene sequence:
>369_bases ATGGAGCGGTCCACCCGCCAGCGCCGCGCCATCCGGAGGGTCCTCCTGGAGACCCGGCGCCCCCTCTCCCCTCGGGAGAT CCTGGAGCTCGCCCGCAAGCAGGTCCCCTCCCTGGGCCTGGCCACGGTCTACCGCAACCTGCGGGCCCTGGTGGAGGAGG GCGCCGTGGTGCCCGTGGCCCTGCCGGGGGAGCCCCTGCGGTACGAGGCGGCAGGCGCCGGGCACCACCACCACTTCCTC TGCCGGGGGTGCGGCCGGGCCTTTGAGCTCCCAGGCTGCCGCCTCGAGGCCCACCTGGACCTTCCCCCCGGGTTTTCGGC CGAGGACCACGAGGTGGTGGTCTACGGGCGCTGCCCCGACTGCGCCTGA
Upstream 100 bases:
>100_bases GGCGGGCAGGCCCAAAAGGAAAAGGAACAAGAGAAGCCGCACGCCCTCACTCTACAGGCAGGAGATGAAAACGCGTTATC GCCTGGGGTAGGCTGAAGGC
Downstream 100 bases:
>100_bases GCGCCCCAAAGCCAACGCTTAGTCCCAGGGAGGGTAGAGGTGCTTGGGCCCGGTCCAGCGCACCTCTTCCAGGGCCCCGT CAAAGCGCAGGAGAGCGGCG
Product: metal uptake regulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MERSTRQRRAIRRVLLETRRPLSPREILELARKQVPSLGLATVYRNLRALVEEGAVVPVALPGEPLRYEAAGAGHHHHFL CRGCGRAFELPGCRLEAHLDLPPGFSAEDHEVVVYGRCPDCA
Sequences:
>Translated_122_residues MERSTRQRRAIRRVLLETRRPLSPREILELARKQVPSLGLATVYRNLRALVEEGAVVPVALPGEPLRYEAAGAGHHHHFL CRGCGRAFELPGCRLEAHLDLPPGFSAEDHEVVVYGRCPDCA >Mature_122_residues MERSTRQRRAIRRVLLETRRPLSPREILELARKQVPSLGLATVYRNLRALVEEGAVVPVALPGEPLRYEAAGAGHHHHFL CRGCGRAFELPGCRLEAHLDLPPGFSAEDHEVVVYGRCPDCA
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 13613; Mature: 13613
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSTRQRRAIRRVLLETRRPLSPREILELARKQVPSLGLATVYRNLRALVEEGAVVPVA CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE LPGEPLRYEAAGAGHHHHFLCRGCGRAFELPGCRLEAHLDLPPGFSAEDHEVVVYGRCPD CCCCCCEEECCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCC CA CC >Mature Secondary Structure MERSTRQRRAIRRVLLETRRPLSPREILELARKQVPSLGLATVYRNLRALVEEGAVVPVA CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE LPGEPLRYEAAGAGHHHHFLCRGCGRAFELPGCRLEAHLDLPPGFSAEDHEVVVYGRCPD CCCCCCEEECCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCC CA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]