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The map label for this gene is 55981259

Identifier: 55981259

GI number: 55981259

Start: 1232078

End: 1233754

Strand: Reverse

Name: 55981259

Synonym: TTHA1290

Alternate gene names: NA

Gene position: 1233754-1232078 (Counterclockwise)

Preceding gene: 55981260

Following gene: 55981258

Centisome position: 66.7

GC content: 71.74

Gene sequence:

>1677_bases
GTGCGGCTTCTCTTGTTCCTTTTCCTTTTGGGCCTGCCCGCCTTGGCCCAGGAAGGCCGCTACGCCTTGGGCAGGATCCT
TGCCCTGGACCCGGGGGCGGGCCTTGCGCAGGTGAGGGTGGAGGGCAGGACCCTGGAGGCCCTCCTGCCGGTGGGCGGGG
AGGGGTTTGGGGTGGGGGACCGGGTGGTGGTCTACCTGGAGGGGGAGCGGGCCTACGTCACCGAGCCCGACCGGATGCCC
TGGCTCGCCGCCTTGGCCCTTCTCTTCGCCCTGGGGGCGGTGGGGCTCGGCCGGGGCAAGGGGCTTAGGGGGCTTTTGGG
GACCCTCTTCGGCTTGCTCCTCCTGGTCTACGTCGTCGTCCCCCGGATCGCCGCCGGGGGGGATCCCTTGCTCCACGCCT
TCCTCGGAAGCCTCGGGGTCCTCGTCCTCAGCGTCTACTTCGTCCACGGCCTCGGCCGCAAGACCACCGCCGCCTTGGGG
GCCACCCTGGCCGCGGTCCTCCTCGTCCTCCTCTTGGGGCGGTTCTTCGCCCAGGCCATGGGCTTCACGGGGCTTGCCTC
CGAGGAGGCCCTCCTCCTCCACCAGTGGGGGGGCGTGGACCTTTTGGGGCTCTACCTGGCGGGGCTCGCCGTGGGGGCCC
TCGGGGCCTTGGCCGACGTGACCGTGACCCAGGCCAGCGTGGTCCAGGTCCCTGGCCCACGCCGACCCCCAGGACCCCCC
CTGGCGCCTTTACCGGCGGGCCATGGAGGTGGGGTACGACCACCTGGGGAGCCTGGTGAACACCCTGGTCCTGGCCTACG
CCGCGGGAAGCCTTCCCCTCTTCCTCCTCCTCACCCGGGACCCCACGCCCCTGCGCTTCCTCCTCAACACCGAGCCCTTC
GCCGCCGAGCTCGTGGGCATGCTCCTCGGGTCCTTGGGGCTCGTGCTCGCGGTCCCCCTCTCCACCCTCTTCGCCGCCTT
TCTGCTCGCCGGGGGGAAGGGAGAGGGCGGGGATCACGCCCACCCCCACTAGGGGCGCGTAAGATGGGGCCATGCGCCTT
CTCCACACCGCCGACTGGCACCTGGGCAAGCTCCTCAAGGGGGTGGACCGGACCCCGGAGATCGCCGCCGCCCTCCGGGA
CCTTCTGGGCCTGGTCCGGTCCGAGCGGGTGGACCTGGTGGTGGTCTCCGGGGACCTGTTTGACCGGCCCCAGGTTTCGG
CGGAGGCCGAGGCTTGCGCGGTGGAGTTCTTCATGGAGCTCAAGGCCCTTGGGGTCCCGGCCCTGGTCATCGCCGGCAAC
CACGACCCCAAAGAGCGCCTCGAGGCCCTCGCCCCCCTTCTCGGGCTTGCGGGGGCCCGGGTCCGGGGCCGCCTCCTCTT
CGCCGAGGAGGGAGGGGTGGTGGAGGTGGGCGGGGTGCGGGCGGGGCTTCTGCCCTTCGTTTCCGAGCGCCTCCTCGTCC
GGCGCCTCTTCCAGGAGGACGAGGTCCTGCACCGCACCTACGCCGAGGCCCTGCGCCGGGTGCTGGACAACCTCAAAAGC
CCTCTTCTCCTGGGCCACTTCGCCGTGGAGGGGGCGAGGCCCGGGGGAGGGGAGTTCGTCTTCCACCTGGTGGGAAGCTA
CGCCGTCCCCCGGGCGAGCCTGCCTTTGGAGGTCCGCTACCTCGCCCTGGGCCACGTCCACCGGCAACAGCAGGTGA

Upstream 100 bases:

>100_bases
GACCCTCCGGATGGCGCGGCGCTGGCGGGTGGACCGCTCCATGCCTTCAGCCTACCCCAGGCGATAACGCGTTTTCATCT
CCTGCCTGTAGAGTGAGGGC

Downstream 100 bases:

>100_bases
GCGAGGCCCCCGTGGCCTGGTACCCGGGAAGCCTGGTGCAGCTGGACTTTGGCGAGGGGGAGGGGGCGGAGCGGGGGGCG
CTCCTCGTGGAGCTTCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRLLLFLFLLGLPALAQEGRYALGRILALDPGAGLAQVRVEGRTLEALLPVGGEGFGVGDRVVVYLEGERAYVTEPDRMP
WLAALALLFALGAVGLGRGKGLRGLLGTLFGLLLLVYVVVPRIAAGGDPLLHAFLGSLGVLVLSVYFVHGLGRKTTAALG
ATLAAVLLVLLLGRFFAQAMGFTGLASEEALLLHQWGGVDLLGLYLAGLAVGALGALADVTVTQASVVQVPGPRRPPGPP
LAPLPAGHGGGVRPPGEPGEHPGPGLRRGKPSPLPPPHPGPHAPALPPQHRALRRRARGHAPRVLGARARGPPLHPLRRL
SARRGEGRGRGSRPPPLGARKMGPCAFSTPPTGTWASSSRGWTGPRRSPPPSGTFWAWSGPSGWTWWWSPGTCLTGPRFR
RRPRLARWSSSWSSRPLGSRPWSSPATTTPKSASRPSPPFSGLRGPGSGAASSSPRREGWWRWAGCGRGFCPSFPSASSS
GASSRRTRSCTAPTPRPCAGCWTTSKALFSWATSPWRGRGPGEGSSSSTWWEATPSPGRACLWRSATSPWATSTGNSR

Sequences:

>Translated_558_residues
MRLLLFLFLLGLPALAQEGRYALGRILALDPGAGLAQVRVEGRTLEALLPVGGEGFGVGDRVVVYLEGERAYVTEPDRMP
WLAALALLFALGAVGLGRGKGLRGLLGTLFGLLLLVYVVVPRIAAGGDPLLHAFLGSLGVLVLSVYFVHGLGRKTTAALG
ATLAAVLLVLLLGRFFAQAMGFTGLASEEALLLHQWGGVDLLGLYLAGLAVGALGALADVTVTQASVVQVPGPRRPPGPP
LAPLPAGHGGGVRPPGEPGEHPGPGLRRGKPSPLPPPHPGPHAPALPPQHRALRRRARGHAPRVLGARARGPPLHPLRRL
SARRGEGRGRGSRPPPLGARKMGPCAFSTPPTGTWASSSRGWTGPRRSPPPSGTFWAWSGPSGWTWWWSPGTCLTGPRFR
RRPRLARWSSSWSSRPLGSRPWSSPATTTPKSASRPSPPFSGLRGPGSGAASSSPRREGWWRWAGCGRGFCPSFPSASSS
GASSRRTRSCTAPTPRPCAGCWTTSKALFSWATSPWRGRGPGEGSSSSTWWEATPSPGRACLWRSATSPWATSTGNSR
>Mature_558_residues
MRLLLFLFLLGLPALAQEGRYALGRILALDPGAGLAQVRVEGRTLEALLPVGGEGFGVGDRVVVYLEGERAYVTEPDRMP
WLAALALLFALGAVGLGRGKGLRGLLGTLFGLLLLVYVVVPRIAAGGDPLLHAFLGSLGVLVLSVYFVHGLGRKTTAALG
ATLAAVLLVLLLGRFFAQAMGFTGLASEEALLLHQWGGVDLLGLYLAGLAVGALGALADVTVTQASVVQVPGPRRPPGPP
LAPLPAGHGGGVRPPGEPGEHPGPGLRRGKPSPLPPPHPGPHAPALPPQHRALRRRARGHAPRVLGARARGPPLHPLRRL
SARRGEGRGRGSRPPPLGARKMGPCAFSTPPTGTWASSSRGWTGPRRSPPPSGTFWAWSGPSGWTWWWSPGTCLTGPRFR
RRPRLARWSSSWSSRPLGSRPWSSPATTTPKSASRPSPPFSGLRGPGSGAASSSPRREGWWRWAGCGRGFCPSFPSASSS
GASSRRTRSCTAPTPRPCAGCWTTSKALFSWATSPWRGRGPGEGSSSSTWWEATPSPGRACLWRSATSPWATSTGNSR

Specific function: Unknown

COG id: COG5438

COG function: function code S; Predicted multitransmembrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58615; Mature: 58615

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLFLFLLGLPALAQEGRYALGRILALDPGAGLAQVRVEGRTLEALLPVGGEGFGVGD
CHHHHHHHHHCCHHHHHCCCHHHCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCC
RVVVYLEGERAYVTEPDRMPWLAALALLFALGAVGLGRGKGLRGLLGTLFGLLLLVYVVV
EEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
PRIAAGGDPLLHAFLGSLGVLVLSVYFVHGLGRKTTAALGATLAAVLLVLLLGRFFAQAM
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFTGLASEEALLLHQWGGVDLLGLYLAGLAVGALGALADVTVTQASVVQVPGPRRPPGPP
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
LAPLPAGHGGGVRPPGEPGEHPGPGLRRGKPSPLPPPHPGPHAPALPPQHRALRRRARGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
APRVLGARARGPPLHPLRRLSARRGEGRGRGSRPPPLGARKMGPCAFSTPPTGTWASSSR
CCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GWTGPRRSPPPSGTFWAWSGPSGWTWWWSPGTCLTGPRFRRRPRLARWSSSWSSRPLGSR
CCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCC
PWSSPATTTPKSASRPSPPFSGLRGPGSGAASSSPRREGWWRWAGCGRGFCPSFPSASSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
GASSRRTRSCTAPTPRPCAGCWTTSKALFSWATSPWRGRGPGEGSSSSTWWEATPSPGRA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCE
CLWRSATSPWATSTGNSR
EEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLLLFLFLLGLPALAQEGRYALGRILALDPGAGLAQVRVEGRTLEALLPVGGEGFGVGD
CHHHHHHHHHCCHHHHHCCCHHHCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCC
RVVVYLEGERAYVTEPDRMPWLAALALLFALGAVGLGRGKGLRGLLGTLFGLLLLVYVVV
EEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
PRIAAGGDPLLHAFLGSLGVLVLSVYFVHGLGRKTTAALGATLAAVLLVLLLGRFFAQAM
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFTGLASEEALLLHQWGGVDLLGLYLAGLAVGALGALADVTVTQASVVQVPGPRRPPGPP
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
LAPLPAGHGGGVRPPGEPGEHPGPGLRRGKPSPLPPPHPGPHAPALPPQHRALRRRARGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
APRVLGARARGPPLHPLRRLSARRGEGRGRGSRPPPLGARKMGPCAFSTPPTGTWASSSR
CCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GWTGPRRSPPPSGTFWAWSGPSGWTWWWSPGTCLTGPRFRRRPRLARWSSSWSSRPLGSR
CCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCC
PWSSPATTTPKSASRPSPPFSGLRGPGSGAASSSPRREGWWRWAGCGRGFCPSFPSASSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
GASSRRTRSCTAPTPRPCAGCWTTSKALFSWATSPWRGRGPGEGSSSSTWWEATPSPGRA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCE
CLWRSATSPWATSTGNSR
EEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA