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The map label for this gene is cycA [H]

Identifier: 55981204

GI number: 55981204

Start: 1172790

End: 1173176

Strand: Reverse

Name: cycA [H]

Synonym: TTHA1235

Alternate gene names: 55981204

Gene position: 1173176-1172790 (Counterclockwise)

Preceding gene: 55981205

Following gene: 55981196

Centisome position: 63.42

GC content: 71.06

Gene sequence:

>387_bases
ATGAAGAAGGCCCTGGTCCTGGCCCTCCTCCTGGGCCTTTTCGCCCAGGGGCAGGCGGTCCAAGGGGAAGCCCTTTGGAA
GCGCCTCTGCGCCCAGTGCCACGGGGGGCGGGCCCAGGGGGCGCGGCCCTACCCGGGCCTCGAGGCGGCGGCCCCCCTCT
TTAGGACCCCTGAGGGCCGGCGCTACCTCGTCCTCGTGCTCCTCTATGGAAAGCGGGGGGAGGCGGGCCTCATGCCGGGC
TTCCCCCAGCTTGGCGACGAGGAGCTCGCCGCCCTGCTCAACCACCTCATGGCCCTCCTCAAGGTGCGGGCCGAGCCCTT
CAATCCCGAGGACATCAAAAGGGAGCGGGGCCAGAACCTGGCCCCGGACCGGATCCAGAGGCCCTAG

Upstream 100 bases:

>100_bases
CAAAGACCTCGGCCCTGACATCGTCCTCTACGACCAGATTTGGACCGAGGTTAAGGCCCACTAAACCCGGGGCCAGGGGG
GCCGGGCGTATACTGGGCCC

Downstream 100 bases:

>100_bases
AGCGGGTCTTCCAGCACCGCCCCCTCGTCCGCCTGGCGCACCAGGGCGGCGTAGCGGGCGAAGAGGCCGTGGGTGAAGGC
GGGGGGTCGGGGCCGCCAGC

Product: cytochrome C-552 (C552)

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKKALVLALLLGLFAQGQAVQGEALWKRLCAQCHGGRAQGARPYPGLEAAAPLFRTPEGRRYLVLVLLYGKRGEAGLMPG
FPQLGDEELAALLNHLMALLKVRAEPFNPEDIKRERGQNLAPDRIQRP

Sequences:

>Translated_128_residues
MKKALVLALLLGLFAQGQAVQGEALWKRLCAQCHGGRAQGARPYPGLEAAAPLFRTPEGRRYLVLVLLYGKRGEAGLMPG
FPQLGDEELAALLNHLMALLKVRAEPFNPEDIKRERGQNLAPDRIQRP
>Mature_128_residues
MKKALVLALLLGLFAQGQAVQGEALWKRLCAQCHGGRAQGARPYPGLEAAAPLFRTPEGRRYLVLVLLYGKRGEAGLMPG
FPQLGDEELAALLNHLMALLKVRAEPFNPEDIKRERGQNLAPDRIQRP

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14079; Mature: 14079

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALVLALLLGLFAQGQAVQGEALWKRLCAQCHGGRAQGARPYPGLEAAAPLFRTPEGR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCC
RYLVLVLLYGKRGEAGLMPGFPQLGDEELAALLNHLMALLKVRAEPFNPEDIKRERGQNL
EEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
APDRIQRP
CCCCCCCC
>Mature Secondary Structure
MKKALVLALLLGLFAQGQAVQGEALWKRLCAQCHGGRAQGARPYPGLEAAAPLFRTPEGR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCC
RYLVLVLLYGKRGEAGLMPGFPQLGDEELAALLNHLMALLKVRAEPFNPEDIKRERGQNL
EEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
APDRIQRP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]