Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981189

Identifier: 55981189

GI number: 55981189

Start: 1159547

End: 1161046

Strand: Direct

Name: 55981189

Synonym: TTHA1220

Alternate gene names: NA

Gene position: 1159547-1161046 (Clockwise)

Preceding gene: 55981188

Following gene: 55981190

Centisome position: 62.69

GC content: 65.2

Gene sequence:

>1500_bases
ATGAACCGGAAAGGCATAGCAGTGGTGGTGGCCCTCATCGGGATGACGGTGATCCTCATGCTCTCCCTGGCCATGGTGCA
AAGCGCCCTAGGCAACCTTAAGACCGGGAGCGACCTCCTGAACCGGGCCCAGGCCCGCCAGCGGGCGGAGGCGGGCGTGG
ACCACGCCCTGGCTTACCTTGACGGCAAGACGGCCTTAAGCGCCCCCAAAACCCTCTCCGGCCAAGGCTACCAGGTCACC
CTCACCCCCCAGAACCCCCAGGGAGATGAGATCCGGATAGAAAGCCAGGGGCAGATGGGCCTCGCCCGGCACACCGCCGT
GGCCGTGGTGCGCCTCCAGCCCGTTCCCGCCCAGGCGCAAAACCCCCTGTTTGGCCAGGGATGGATCAGCGGCGGGCGCA
TCACCATCAACGGGGGGGTGGACCTGTGGGGAAGCCGGCTCCACGCCGACCAAGGCTACGCCAACCTCTCGGGCCAAATC
GGGGTTTGCGACAGCTCAGGTCAAAACTGCAAAAACCTTAACCAGGTCAACCCACCGCCCATCACGGGAGGGCAAGGGGT
CACGGACACCCAGTGCAACGCGAGCGGGAACAACAAGGTGGTCTGCGATGGTTCCGCGCCCAAGTATAAGGTCTGCCCGG
TGTATCAGACCCCCTCCGACCCCAACCTCACGTGCCTGGACGCCGTCACAGGTAGGCAAGTGCGATGGGACCAGGCCACC
CGCATTCGCAAGCCCGACGTGGACGCGATCAGCAAGGACCGCCTTGGGGTCAGGGCCAGCAGCCCCTACACCGACGCCAC
CACGAATCGCCTCTGCGACGTCCGCTTCACCAGCCTAGACCCAGGAAACGCTGGCGAGCTCACGCAGTTCCTCCTGAGTA
GGGGCATCTCCGGGAGCTTCCCTCAGGACGTCAACCAGCTCCTTCCCCTAGTGCTCAACGCCCTGAACGGGAGTGGGCTC
AGGGTGTGCGTTCAGAATAACGTTACTCTTCCAGGTGGCACTTCTTTGGGCAACGTTACCTTCTACGTGGGCGGCACCTT
CCAGGTCAACGGGACTGTCACCCTCAACGGGGTGAGCGTGGCCGCCGGGTCGGGCATCAACCTCGGGGACCTCCAGACCA
CGGACAGCCGCTTCTACACAGGGGGAACCCTCAACCTGAACAACGGCGCCACCTTCCGGGGCGACTCTACCCTCGCCTCC
CGGCAGTCCCTTACCTTCAACGGCCGGGCCGACCTGCTGAATAACCGCGCCCTCCTGGTGGTGAGCGAGGGGGACATCAC
CTTCAACGGCCGGGCGGACACCCACGCCTTCCTGTGGGCGGGAGGGACCATCACCTTCAACGGCACCGGGGCCTTTATCG
GCGGGGCGGTGAGCCTCGGGGGCACCATCCGAAACGGCGGGGGCCAGTTCTACATCCAAAACTCCAACGCCCTCAACAGC
GACCTGCCCAACACAGAGACTGGCACCCGGCCCCGGCCCGTGGTCCTGAGCCGGAGGTAA

Upstream 100 bases:

>100_bases
CTTCTGGAACTTCCCGGTGCGCCAAACGACGGACGTTTGCGGGCCGAGAAGCTCTGGATCGTCCAGACCCCCAACCTGGC
CCGCTGAAGGGAGGAACGGG

Downstream 100 bases:

>100_bases
TCCTTAGCCCAAGCCCGCTCCAGGCGGCGGGGTGGGTCCGGCTTTCACACCGTTTTCACACCCCTCCCCCATCCTGAAGT
TGACTCCCCCAAAAGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNRKGIAVVVALIGMTVILMLSLAMVQSALGNLKTGSDLLNRAQARQRAEAGVDHALAYLDGKTALSAPKTLSGQGYQVT
LTPQNPQGDEIRIESQGQMGLARHTAVAVVRLQPVPAQAQNPLFGQGWISGGRITINGGVDLWGSRLHADQGYANLSGQI
GVCDSSGQNCKNLNQVNPPPITGGQGVTDTQCNASGNNKVVCDGSAPKYKVCPVYQTPSDPNLTCLDAVTGRQVRWDQAT
RIRKPDVDAISKDRLGVRASSPYTDATTNRLCDVRFTSLDPGNAGELTQFLLSRGISGSFPQDVNQLLPLVLNALNGSGL
RVCVQNNVTLPGGTSLGNVTFYVGGTFQVNGTVTLNGVSVAAGSGINLGDLQTTDSRFYTGGTLNLNNGATFRGDSTLAS
RQSLTFNGRADLLNNRALLVVSEGDITFNGRADTHAFLWAGGTITFNGTGAFIGGAVSLGGTIRNGGGQFYIQNSNALNS
DLPNTETGTRPRPVVLSRR

Sequences:

>Translated_499_residues
MNRKGIAVVVALIGMTVILMLSLAMVQSALGNLKTGSDLLNRAQARQRAEAGVDHALAYLDGKTALSAPKTLSGQGYQVT
LTPQNPQGDEIRIESQGQMGLARHTAVAVVRLQPVPAQAQNPLFGQGWISGGRITINGGVDLWGSRLHADQGYANLSGQI
GVCDSSGQNCKNLNQVNPPPITGGQGVTDTQCNASGNNKVVCDGSAPKYKVCPVYQTPSDPNLTCLDAVTGRQVRWDQAT
RIRKPDVDAISKDRLGVRASSPYTDATTNRLCDVRFTSLDPGNAGELTQFLLSRGISGSFPQDVNQLLPLVLNALNGSGL
RVCVQNNVTLPGGTSLGNVTFYVGGTFQVNGTVTLNGVSVAAGSGINLGDLQTTDSRFYTGGTLNLNNGATFRGDSTLAS
RQSLTFNGRADLLNNRALLVVSEGDITFNGRADTHAFLWAGGTITFNGTGAFIGGAVSLGGTIRNGGGQFYIQNSNALNS
DLPNTETGTRPRPVVLSRR
>Mature_499_residues
MNRKGIAVVVALIGMTVILMLSLAMVQSALGNLKTGSDLLNRAQARQRAEAGVDHALAYLDGKTALSAPKTLSGQGYQVT
LTPQNPQGDEIRIESQGQMGLARHTAVAVVRLQPVPAQAQNPLFGQGWISGGRITINGGVDLWGSRLHADQGYANLSGQI
GVCDSSGQNCKNLNQVNPPPITGGQGVTDTQCNASGNNKVVCDGSAPKYKVCPVYQTPSDPNLTCLDAVTGRQVRWDQAT
RIRKPDVDAISKDRLGVRASSPYTDATTNRLCDVRFTSLDPGNAGELTQFLLSRGISGSFPQDVNQLLPLVLNALNGSGL
RVCVQNNVTLPGGTSLGNVTFYVGGTFQVNGTVTLNGVSVAAGSGINLGDLQTTDSRFYTGGTLNLNNGATFRGDSTLAS
RQSLTFNGRADLLNNRALLVVSEGDITFNGRADTHAFLWAGGTITFNGTGAFIGGAVSLGGTIRNGGGQFYIQNSNALNS
DLPNTETGTRPRPVVLSRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52316; Mature: 52316

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKGIAVVVALIGMTVILMLSLAMVQSALGNLKTGSDLLNRAQARQRAEAGVDHALAYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHEEEEE
DGKTALSAPKTLSGQGYQVTLTPQNPQGDEIRIESQGQMGLARHTAVAVVRLQPVPAQAQ
CCCHHCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCCCC
NPLFGQGWISGGRITINGGVDLWGSRLHADQGYANLSGQIGVCDSSGQNCKNLNQVNPPP
CCCCCCCEECCCEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
ITGGQGVTDTQCNASGNNKVVCDGSAPKYKVCPVYQTPSDPNLTCLDAVTGRQVRWDQAT
CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCEEECCHHH
RIRKPDVDAISKDRLGVRASSPYTDATTNRLCDVRFTSLDPGNAGELTQFLLSRGISGSF
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCC
PQDVNQLLPLVLNALNGSGLRVCVQNNVTLPGGTSLGNVTFYVGGTFQVNGTVTLNGVSV
HHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEECCEEEECCEEEECCEEE
AAGSGINLGDLQTTDSRFYTGGTLNLNNGATFRGDSTLASRQSLTFNGRADLLNNRALLV
ECCCCCCCCCCCCCCCEEEECCEEECCCCCEECCCCCHHCCCEEEECCCHHHCCCCEEEE
VSEGDITFNGRADTHAFLWAGGTITFNGTGAFIGGAVSLGGTIRNGGGQFYIQNSNALNS
EECCCEEECCCCCCEEEEEECCEEEECCCCCEECCEEEECCEEECCCCEEEEECCCCCCC
DLPNTETGTRPRPVVLSRR
CCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MNRKGIAVVVALIGMTVILMLSLAMVQSALGNLKTGSDLLNRAQARQRAEAGVDHALAYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHEEEEE
DGKTALSAPKTLSGQGYQVTLTPQNPQGDEIRIESQGQMGLARHTAVAVVRLQPVPAQAQ
CCCHHCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCCCC
NPLFGQGWISGGRITINGGVDLWGSRLHADQGYANLSGQIGVCDSSGQNCKNLNQVNPPP
CCCCCCCEECCCEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
ITGGQGVTDTQCNASGNNKVVCDGSAPKYKVCPVYQTPSDPNLTCLDAVTGRQVRWDQAT
CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCEEECCHHH
RIRKPDVDAISKDRLGVRASSPYTDATTNRLCDVRFTSLDPGNAGELTQFLLSRGISGSF
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCC
PQDVNQLLPLVLNALNGSGLRVCVQNNVTLPGGTSLGNVTFYVGGTFQVNGTVTLNGVSV
HHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEECCEEEECCEEEECCEEE
AAGSGINLGDLQTTDSRFYTGGTLNLNNGATFRGDSTLASRQSLTFNGRADLLNNRALLV
ECCCCCCCCCCCCCCCEEEECCEEECCCCCEECCCCCHHCCCEEEECCCHHHCCCCEEEE
VSEGDITFNGRADTHAFLWAGGTITFNGTGAFIGGAVSLGGTIRNGGGQFYIQNSNALNS
EECCCEEECCCCCCEEEEEECCEEEECCCCCEECCEEEECCEEECCCCEEEEECCCCCCC
DLPNTETGTRPRPVVLSRR
CCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA