Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 55981114

GI number: 55981114

Start: 1090767

End: 1091510

Strand: Direct

Name: etfB [H]

Synonym: TTHA1145

Alternate gene names: 55981114

Gene position: 1090767-1091510 (Clockwise)

Preceding gene: 55981113

Following gene: 55981115

Centisome position: 58.97

GC content: 68.82

Gene sequence:

>744_bases
ATGAAGTTCGTGGCGGTGATCCGGCAGGTGCCCGACGGCGAGAGCAAGCTCAGGATCCAGGGGGATCGCGTGGACCTCTC
CGGGGCCACGATGATCCTGGACCAGATGGACGAGTACGCGGTGGAGGAGGCCATCCGCCTCAAGGAGAGGCACGGCGGGG
AGGCGGTGGTGGTGGGGTTCGGCCCCGAGCGCACCGAGGAGGCCATCCGCACCGCCTTAGCCATGGGGATGGACCGCGGG
GTCCACGTGGTCTACGAGGGCTTTGCCGACCCCGTGGCCGTGGCCGAGGCCCTGGTGGAGGTGCTCAAGGAGGAGGCCCC
CACCCTGGTCCTCACCGGGGGGCAGCAGGCGGACTGGGACAGCCAAGCCCTAGGGGGCGCCCTGGCGGAGGCCCTAGGGG
TGCCGGTGGTGGCCTGGACCACCGCCCTCGAGCTGGAAGGGGACACGGCCAAGGCCAAGCACGACCTGGACGAGGGGGCG
GAGTGGGTTAGGGTGCGGCTTCCCGCCGTCTTCACCACGCAGCAGGGCCTGAACGAGCCCCGCTACCCCACCCTGCCCGG
GATCATGAAGGCCAAGAAGAAGGAGATCCGGAAGGTGCAGGCGAGCCTTACCCCCAAGGTCACCCTGATTTCCGAGGAGA
TCCAGGAGAAGTCCAGGCTTGGCAAGATCCTGGACGGCAAGGACCCCGTGGCGGCGGCCGAAGAGCTCGTGCGGCTCCTC
CACGAGGAGGCCAAGGTCATCTAG

Upstream 100 bases:

>100_bases
TCCTCAGGGACGTGAAGCTCAACCAGATCTACGAGGGGACCAACGAGATCCAGAGGCTCATCATCGCCAGGCACATCCTG
GCGGAGTGAGGAGGTGAGGA

Downstream 100 bases:

>100_bases
GAGGTGCCTATGGTGCTCGTAGTCTTGGACCACGACGGAAACCGGCTCAAGAAGGGAAGCCTCGAGGCCCTGACCCGGGC
CCGTGACCTGGCCCAGGCCC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKFVAVIRQVPDGESKLRIQGDRVDLSGATMILDQMDEYAVEEAIRLKERHGGEAVVVGFGPERTEEAIRTALAMGMDRG
VHVVYEGFADPVAVAEALVEVLKEEAPTLVLTGGQQADWDSQALGGALAEALGVPVVAWTTALELEGDTAKAKHDLDEGA
EWVRVRLPAVFTTQQGLNEPRYPTLPGIMKAKKKEIRKVQASLTPKVTLISEEIQEKSRLGKILDGKDPVAAAEELVRLL
HEEAKVI

Sequences:

>Translated_247_residues
MKFVAVIRQVPDGESKLRIQGDRVDLSGATMILDQMDEYAVEEAIRLKERHGGEAVVVGFGPERTEEAIRTALAMGMDRG
VHVVYEGFADPVAVAEALVEVLKEEAPTLVLTGGQQADWDSQALGGALAEALGVPVVAWTTALELEGDTAKAKHDLDEGA
EWVRVRLPAVFTTQQGLNEPRYPTLPGIMKAKKKEIRKVQASLTPKVTLISEEIQEKSRLGKILDGKDPVAAAEELVRLL
HEEAKVI
>Mature_247_residues
MKFVAVIRQVPDGESKLRIQGDRVDLSGATMILDQMDEYAVEEAIRLKERHGGEAVVVGFGPERTEEAIRTALAMGMDRG
VHVVYEGFADPVAVAEALVEVLKEEAPTLVLTGGQQADWDSQALGGALAEALGVPVVAWTTALELEGDTAKAKHDLDEGA
EWVRVRLPAVFTTQQGLNEPRYPTLPGIMKAKKKEIRKVQASLTPKVTLISEEIQEKSRLGKILDGKDPVAAAEELVRLL
HEEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=38.8888888888889, Blast_Score=137, Evalue=8e-33,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=40.084388185654, Blast_Score=130, Evalue=8e-31,
Organism=Escherichia coli, GI2367123, Length=208, Percent_Identity=24.5192307692308, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081682, Length=204, Percent_Identity=26.9607843137255, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=207, Percent_Identity=35.2657004830918, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6321646, Length=234, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24651147, Length=220, Percent_Identity=36.8181818181818, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24651145, Length=220, Percent_Identity=36.8181818181818, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26836; Mature: 26836

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVAVIRQVPDGESKLRIQGDRVDLSGATMILDQMDEYAVEEAIRLKERHGGEAVVVGF
CHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GPERTEEAIRTALAMGMDRGVHVVYEGFADPVAVAEALVEVLKEEAPTLVLTGGQQADWD
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
SQALGGALAEALGVPVVAWTTALELEGDTAKAKHDLDEGAEWVRVRLPAVFTTQQGLNEP
HHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCHHCCHHEEEEECCCCEECHHCCCCC
RYPTLPGIMKAKKKEIRKVQASLTPKVTLISEEIQEKSRLGKILDGKDPVAAAEELVRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HEEAKVI
HHHHCCC
>Mature Secondary Structure
MKFVAVIRQVPDGESKLRIQGDRVDLSGATMILDQMDEYAVEEAIRLKERHGGEAVVVGF
CHHHHHHHHCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GPERTEEAIRTALAMGMDRGVHVVYEGFADPVAVAEALVEVLKEEAPTLVLTGGQQADWD
CCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
SQALGGALAEALGVPVVAWTTALELEGDTAKAKHDLDEGAEWVRVRLPAVFTTQQGLNEP
HHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCHHCCHHEEEEECCCCEECHHCCCCC
RYPTLPGIMKAKKKEIRKVQASLTPKVTLISEEIQEKSRLGKILDGKDPVAAAEELVRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HEEAKVI
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]