Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981085

Identifier: 55981085

GI number: 55981085

Start: 1062691

End: 1063227

Strand: Direct

Name: 55981085

Synonym: TTHA1116

Alternate gene names: NA

Gene position: 1062691-1063227 (Clockwise)

Preceding gene: 55981084

Following gene: 55981087

Centisome position: 57.45

GC content: 69.65

Gene sequence:

>537_bases
ATGCCTAAGGACTGGGACGCCTTCTACCGCAACGCCCCGGAAGACCGCCCCCCGGCCTTCGTGGTGCGGGCCTACGGCCC
CTTCGTCCCCCAGGGTCCCGTGTTGGACCTGGCGGGGGGCCTGGGGCGGAACGCCCGTTACTTCCTGCAAAGGGGCCACC
CCGTGGTCCTGGTGGAAAGGAGCCGGGAAGCCCTAAGGCGGCTTTCGGGCACGCCGGGCCTTACCCTGGTGGCCCTGGAC
CTGGAAGGGGCGGACGCCCCCCAAAGCCTCCCCCAGGGGCCCTTCGCCGGGATCGTGATGGCCTACTACGTGAACCGCCC
CCTCCTCCAAGGCCTCGCCCCCCTCCTCCTCCCCGGGGGGCTGGTGCTTGTGGAGGGCTTCTCCCGGAAGGAGGCCCTGA
GGCGGGGAAGGCCCCATAGTCCCTTCTACTGGGAAGGGGAAGAACTCCTCACCCCTCCCCCGGGCCTGGCCTTAAGGGCC
TTTGGGGAGGGGTGGATGGAAGGGTACCGGGTCTACGCCGTCTACCTCAGGCCTTGA

Upstream 100 bases:

>100_bases
CTCCACCGCCCCGGACTCGCCCTCGCCCTCCCCAAGGCGGTCTTCCGGGGAGGGACCTGCCTCATCCTCACCGTAGGGGG
CCTCCTCGCCTTCCGCAAGG

Downstream 100 bases:

>100_bases
GGCCCCGGGCCACGAGCTCGGCGATGTCCAGGACCTCGAGGGGCTTCTCGTCCTGGGCCACCTCCACGTTCATCATGGCC
ATGCAGAAGGGGCACCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALD
LEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRA
FGEGWMEGYRVYAVYLRP

Sequences:

>Translated_178_residues
MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALD
LEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRA
FGEGWMEGYRVYAVYLRP
>Mature_177_residues
PKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALDL
EGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAF
GEGWMEGYRVYAVYLRP

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19680; Mature: 19549

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVER
CCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEC
SREALRRLSGTPGLTLVALDLEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGG
CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
LVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAFGEGWMEGYRVYAVYLRP
EEEEECCCHHHHHHCCCCCCCCEECCCEECCCCCCCEEHHHHHHHHCCEEEEEEEECC
>Mature Secondary Structure 
PKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVER
CCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEC
SREALRRLSGTPGLTLVALDLEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGG
CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
LVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAFGEGWMEGYRVYAVYLRP
EEEEECCCHHHHHHCCCCCCCCEECCCEECCCCCCCEEHHHHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA