| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is murC [H]
Identifier: 55981054
GI number: 55981054
Start: 1032123
End: 1033463
Strand: Direct
Name: murC [H]
Synonym: TTHA1085
Alternate gene names: 55981054
Gene position: 1032123-1033463 (Clockwise)
Preceding gene: 55981053
Following gene: 55981055
Centisome position: 55.8
GC content: 74.05
Gene sequence:
>1341_bases ATGAGAAAGGCGCACATCATGGGCATTGAAGGCGTGGGCATGAGCGCCCTCGCCCGGCTCCTCATGGCGGAAGGGGTGGC GGTGACGGGGTGCGACCTCGCCCCAGGCCCTAGGGCAAGGCGGCTCGGAGTTCCCGTGCACCACGGGCACGACCCCGGCC ACCTCGCCGACGAGGACACCCTGGTGGTCCCCACCCCCGTGCCCCCGGACCACCCCGAGGTGGTGGAGGCCCGGAAGAGG GGCCTTAGGGTCCTCCGCAGGATGGAGCTCCTCGCCCACTTCCTCGCGCAAAGGCCCTCCGCGGGCGTGACCGGCACCCA CGGCAAGACCACCACCACGGGGATGCTCGCGGCCATCCTCCTGGAGGCGGGCCTGGACCCCTGGGTCTTCCTGGGGGGGG AGCTCGCCCTCCTCCCCGGCAACGCCCGCCCCGGCCGGGGGCCCCGGGTGGCCGAGGTGGACGAGTCGGACCCCCTCTTC CGGGAGGTCCGGGTGAGCGTCGCCGTGGCCACCAACCTGGAGGCGGACCACGTGGCCCCCCGGGGGGAGCGGGCCCCCAA CTACCACGAAAGCCTCGAGGCCCTAAAGGAGGCCATGCGGGGCTTCCTCGCGGGCGCAAAGACCGTTGTGGTCCCCGCAA TGGACCCGGGCCTCCTCGCCCTCACCGAGGGGCTTCCCCGGAGGCTCTTCGGCCCCGGGGGGGAGGTCTGGGCGGAGGCG GTGGACCTAAGCCCCTCCGGGGCCTCCTTCCGCCTCGTCCACCGGGAAGGCCCCCTGGGGGAGGTCCACCTGCGGGTGCC GGGGAGGCACAACGTCCACAACGCCCTCGCCGCCGCCCTCGCCGCCCTGGCCCTGGGGGCGTCCCCGGAGGCCATCTCCC GGGGGCTTTCCCGCTTCCCCGGCGTGGGGCGGCGGTTTGAGCGGGTGGGGGAGGTGGGCGGGGCCTGGGTGGTGGACGAC TACGCCCACCACCCCACCGAGGTCCAGGCCACCCTGGAGGCGGCCCTCCTCTCCGGGCGGCGGGTCCGCGTCTTCTTCCA GCCCCACCGCCTCCTCCGCACCCAGGAGCTCTGGGAGGCCTTCGCCCAGGCCCTCAAGGGGGCCCACGAGGTGGTGGTCC TGCCCGTCTACACCGCGGGAGAGCGGGGCCGGGAAAGCCCCGAGGCCCTCTCCGACCGCATCGCAAAGAGGCTTGAGGAC CTGGGCCGGCCCGCGCGCCGCATGGACAAGGAAGAGGCCCTGGCCTACGCCCGCGCCACGGCAAGGCCCGAGGACCTCCT CCTCTTCATGGGGGCCGGGGACGTGACCCTTCTCGCGCGGAGGCTCGTCCATGAGGGTTGA
Upstream 100 bases:
>100_bases TCGAGGCCCTGGAGGACCTGGAGGCGCGCCGAAGGGCCATGGCCCGCCTCTCCCCCGAGGGGGCGGCGGCGCGCCTCGCC GACCTTCTGGAGGCGTTCCT
Downstream 100 bases:
>100_bases ACGGGTGCTGCTCAAGGACTACACCACCCTGGGGGTAGGGGGGCCGGCGGAGCTTTGGACCGTGGAGACCCGGGAGGAGC TCAAGCGGGCCACCGAGGCC
Product: UDP-N-acetylmuramate--alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MRKAHIMGIEGVGMSALARLLMAEGVAVTGCDLAPGPRARRLGVPVHHGHDPGHLADEDTLVVPTPVPPDHPEVVEARKR GLRVLRRMELLAHFLAQRPSAGVTGTHGKTTTTGMLAAILLEAGLDPWVFLGGELALLPGNARPGRGPRVAEVDESDPLF REVRVSVAVATNLEADHVAPRGERAPNYHESLEALKEAMRGFLAGAKTVVVPAMDPGLLALTEGLPRRLFGPGGEVWAEA VDLSPSGASFRLVHREGPLGEVHLRVPGRHNVHNALAAALAALALGASPEAISRGLSRFPGVGRRFERVGEVGGAWVVDD YAHHPTEVQATLEAALLSGRRVRVFFQPHRLLRTQELWEAFAQALKGAHEVVVLPVYTAGERGRESPEALSDRIAKRLED LGRPARRMDKEEALAYARATARPEDLLLFMGAGDVTLLARRLVHEG
Sequences:
>Translated_446_residues MRKAHIMGIEGVGMSALARLLMAEGVAVTGCDLAPGPRARRLGVPVHHGHDPGHLADEDTLVVPTPVPPDHPEVVEARKR GLRVLRRMELLAHFLAQRPSAGVTGTHGKTTTTGMLAAILLEAGLDPWVFLGGELALLPGNARPGRGPRVAEVDESDPLF REVRVSVAVATNLEADHVAPRGERAPNYHESLEALKEAMRGFLAGAKTVVVPAMDPGLLALTEGLPRRLFGPGGEVWAEA VDLSPSGASFRLVHREGPLGEVHLRVPGRHNVHNALAAALAALALGASPEAISRGLSRFPGVGRRFERVGEVGGAWVVDD YAHHPTEVQATLEAALLSGRRVRVFFQPHRLLRTQELWEAFAQALKGAHEVVVLPVYTAGERGRESPEALSDRIAKRLED LGRPARRMDKEEALAYARATARPEDLLLFMGAGDVTLLARRLVHEG >Mature_446_residues MRKAHIMGIEGVGMSALARLLMAEGVAVTGCDLAPGPRARRLGVPVHHGHDPGHLADEDTLVVPTPVPPDHPEVVEARKR GLRVLRRMELLAHFLAQRPSAGVTGTHGKTTTTGMLAAILLEAGLDPWVFLGGELALLPGNARPGRGPRVAEVDESDPLF REVRVSVAVATNLEADHVAPRGERAPNYHESLEALKEAMRGFLAGAKTVVVPAMDPGLLALTEGLPRRLFGPGGEVWAEA VDLSPSGASFRLVHREGPLGEVHLRVPGRHNVHNALAAALAALALGASPEAISRGLSRFPGVGRRFERVGEVGGAWVVDD YAHHPTEVQATLEAALLSGRRVRVFFQPHRLLRTQELWEAFAQALKGAHEVVVLPVYTAGERGRESPEALSDRIAKRLED LGRPARRMDKEEALAYARATARPEDLLLFMGAGDVTLLARRLVHEG
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=467, Percent_Identity=35.5460385438972, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1790680, Length=472, Percent_Identity=28.1779661016949, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 47916; Mature: 47916
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAHIMGIEGVGMSALARLLMAEGVAVTGCDLAPGPRARRLGVPVHHGHDPGHLADEDT CCCCEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LVVPTPVPPDHPEVVEARKRGLRVLRRMELLAHFLAQRPSAGVTGTHGKTTTTGMLAAIL EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LEAGLDPWVFLGGELALLPGNARPGRGPRVAEVDESDPLFREVRVSVAVATNLEADHVAP HHCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCCHHCCCC RGERAPNYHESLEALKEAMRGFLAGAKTVVVPAMDPGLLALTEGLPRRLFGPGGEVWAEA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHHCCCCHHHHHHH VDLSPSGASFRLVHREGPLGEVHLRVPGRHNVHNALAAALAALALGASPEAISRGLSRFP HCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GVGRRFERVGEVGGAWVVDDYAHHPTEVQATLEAALLSGRRVRVFFQPHRLLRTQELWEA CCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH FAQALKGAHEVVVLPVYTAGERGRESPEALSDRIAKRLEDLGRPARRMDKEEALAYARAT HHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHC ARPEDLLLFMGAGDVTLLARRLVHEG CCCCCEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MRKAHIMGIEGVGMSALARLLMAEGVAVTGCDLAPGPRARRLGVPVHHGHDPGHLADEDT CCCCEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LVVPTPVPPDHPEVVEARKRGLRVLRRMELLAHFLAQRPSAGVTGTHGKTTTTGMLAAIL EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LEAGLDPWVFLGGELALLPGNARPGRGPRVAEVDESDPLFREVRVSVAVATNLEADHVAP HHCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCCHHCCCC RGERAPNYHESLEALKEAMRGFLAGAKTVVVPAMDPGLLALTEGLPRRLFGPGGEVWAEA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHHCCCCHHHHHHH VDLSPSGASFRLVHREGPLGEVHLRVPGRHNVHNALAAALAALALGASPEAISRGLSRFP HCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GVGRRFERVGEVGGAWVVDDYAHHPTEVQATLEAALLSGRRVRVFFQPHRLLRTQELWEA CCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH FAQALKGAHEVVVLPVYTAGERGRESPEALSDRIAKRLEDLGRPARRMDKEEALAYARAT HHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHC ARPEDLLLFMGAGDVTLLARRLVHEG CCCCCEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA