Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981026

Identifier: 55981026

GI number: 55981026

Start: 1001982

End: 1002524

Strand: Direct

Name: 55981026

Synonym: TTHA1057

Alternate gene names: NA

Gene position: 1001982-1002524 (Clockwise)

Preceding gene: 55981025

Following gene: 55981027

Centisome position: 54.17

GC content: 65.75

Gene sequence:

>543_bases
ATGGCGGAACCCCTCGGCCACTACCAGGAGCAGCGGGTAGGGGTGTTCGTGGACACCCAGAACCTCTACCACTCGGCCCG
GGACTACTACGAGCGCAACGTCAACTTTGAGAGCCTCCTGCGCTTCGCCGTGGGGGGAAGACGTCTGGTGCGGGCCACCG
CCTACGTGGTGGAGAAGGAGGGGGACACCTCCGCCTGGCCCTTCATCTACAAGCTTTCCACCATCGGGTACAAGGTCCGC
CGGATGTACCTCACGGTGAAGGAGACGGGGGAAGGCGGGCGGCCCATCTACTCCGGCAACTGGGACATGGGCATCGCCGC
CGACATGGTCCGGCTCATGCCCTACCTGGACGTGGTGGTCCTGGGGAGCGGGGACGGGGACTTCGTGGAGATCCTCGAGG
TCCTGATGGAGCGGGGCATCCGGGTGGAGGTGATCGCCTTCCGGGAGACCACGGCCCAGCGGCTCATTGACGCCGTGGAC
CGCTTCACCCACCTCCCCGAGATCCCCGGGGCCTTCATGGAACCCAAAAACGCTGAGCGCTAG

Upstream 100 bases:

>100_bases
CATGGTGGAGGCGGAGGAGGGGGCGGAGGAGGTGGCGCGGGAGCTCGCCGAGCGCGTCCGGGCCCTCTCCCAAGAGGCCC
AGGCGGTATGATGGACCCCG

Downstream 100 bases:

>100_bases
CCGTGGAAGGCCTGGAAGCCTACGACTACCACCTCCCTCCCGAGCAGATCGCCCAGGAAGGGGTGGAGCCCAGGGACATG
GCCCGGCTGATGGTGGTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVR
RMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVD
RFTHLPEIPGAFMEPKNAER

Sequences:

>Translated_180_residues
MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVR
RMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVD
RFTHLPEIPGAFMEPKNAER
>Mature_179_residues
AEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVRR
MYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDR
FTHLPEIPGAFMEPKNAER

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20561; Mature: 20430

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKE
CCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECC
GDTSAWPFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVV
CCCCCCHHEEHHHHHHHEEEHEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHEEEE
LGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDRFTHLPEIPGAFMEPKNAER
EECCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKE
CCCCCCHHHHCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECC
GDTSAWPFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVV
CCCCCCHHEEHHHHHHHEEEHEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHEEEE
LGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDRFTHLPEIPGAFMEPKNAER
EECCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA