Click here to switch to the map view.

The map label for this gene is 55981003

Identifier: 55981003

GI number: 55981003

Start: 982470

End: 982688

Strand: Reverse

Name: 55981003

Synonym: TTHA1034

Alternate gene names: NA

Gene position: 982688-982470 (Counterclockwise)

Preceding gene: 55981004

Following gene: 55981002

Centisome position: 53.13

GC content: 69.41

Gene sequence:

>219_bases
ATGAAGGACGTGGTGGAGTACCTGGTGCGCTACCTGGTGGACCGCCCCGAGGCGGTGCGGGTCCAGGTGCGTAGGGGCAA
GGAGGGCACGGTCTACCTGGTGGAGGTCGCCCCGGAGGACAAGGGGCGGCTCATCGGCAAGGGCGGGAGGGTCATTGAGT
CCCTCCGCACCGTGGTCCGGGCGTACGCCAAGCGCAAGGTGGGCGTGGAGGTGCGCTGA

Upstream 100 bases:

>100_bases
CAGGCGGGGGTCTTCCGGCAGGAGGCCCGGGAGGGCGCCTGAGGAAAAGGCCGGCCGAGGCCCCGGGAAGTCCCCGGGGC
CTTTCGTTTAGCATGAACGT

Downstream 100 bases:

>100_bases
CGCCGCGGCGGAAGGACCTGGCATAATGAGGGTATGCGCCTGGTGGAGATCGGCCGGTTCGGCGCCCCTTACGCCCTGAA
AGGGGGCCTCAGGTTCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKDVVEYLVRYLVDRPEAVRVQVRRGKEGTVYLVEVAPEDKGRLIGKGGRVIESLRTVVRAYAKRKVGVEVR

Sequences:

>Translated_72_residues
MKDVVEYLVRYLVDRPEAVRVQVRRGKEGTVYLVEVAPEDKGRLIGKGGRVIESLRTVVRAYAKRKVGVEVR
>Mature_72_residues
MKDVVEYLVRYLVDRPEAVRVQVRRGKEGTVYLVEVAPEDKGRLIGKGGRVIESLRTVVRAYAKRKVGVEVR

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8212; Mature: 8212

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVVEYLVRYLVDRPEAVRVQVRRGKEGTVYLVEVAPEDKGRLIGKGGRVIESLRTVVR
CHHHHHHHHHHHHCCCHHEEEEEECCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHH
AYAKRKVGVEVR
HHHHHCCCCCCC
>Mature Secondary Structure
MKDVVEYLVRYLVDRPEAVRVQVRRGKEGTVYLVEVAPEDKGRLIGKGGRVIESLRTVVR
CHHHHHHHHHHHHCCCHHEEEEEECCCCCCEEEEEECCCCCCCEECCCCHHHHHHHHHHH
AYAKRKVGVEVR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA