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The map label for this gene is 55980978

Identifier: 55980978

GI number: 55980978

Start: 955973

End: 956287

Strand: Direct

Name: 55980978

Synonym: TTHA1009

Alternate gene names: NA

Gene position: 955973-956287 (Clockwise)

Preceding gene: 55980977

Following gene: 55980979

Centisome position: 51.68

GC content: 67.94

Gene sequence:

>315_bases
ATGCGCTTGCTTTCGGAGGGGGACCCCATCCAGCGCCGCCTCTTCCAAGCTGCCTTGGAGCTCCTCGCGGAGCGGGGCTA
CCGCGGGGCCACCACCCGGGAGATCGCCCGGCGGGCGGGGGTGAGCGAGGTGACCCTCTTCCGCCACTTCGGTTCTCATC
TCCACCCTCGCGCGGACCCAGGTGCAGGCCGTCTTCGGAACCTACGCCTACGGCTTCCCCGCCATCTTCCTCTCCGGCTT
CGTCTTCCCCATAGAGGGCATACCCCCCTTCTTCCAGGCCCTCTCCTACCTGGTCCCCGCCCGCTACCTCATTGA

Upstream 100 bases:

>100_bases
TCCGGACCCCATGAAGCCAAAATCCCTCGGACCCCAAGAGCCCTGGAGGACGGGGAGTTGACGCGCTGGGGAAAGGGCGC
TTAGCCTCAGGGAAGAAAGT

Downstream 100 bases:

>100_bases
GGTCCTGCGGGGGGTGATGCTCAAGGGGGTGGGGTGGGAGGTCCTCTGGCCGGACCTCCTGGCCCTGGCCCCTTTCGCCG
TCCTCGTCCTCTTCCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRLLSEGDPIQRRLFQAALELLAERGYRGATTREIARRAGVSEVTLFRHFGSHLHPRADPGAGRLRNLRLRLPRHLPLRL
RLPHRGHTPLLPGPLLPGPRPLPH

Sequences:

>Translated_104_residues
MRLLSEGDPIQRRLFQAALELLAERGYRGATTREIARRAGVSEVTLFRHFGSHLHPRADPGAGRLRNLRLRLPRHLPLRL
RLPHRGHTPLLPGPLLPGPRPLPH
>Mature_104_residues
MRLLSEGDPIQRRLFQAALELLAERGYRGATTREIARRAGVSEVTLFRHFGSHLHPRADPGAGRLRNLRLRLPRHLPLRL
RLPHRGHTPLLPGPLLPGPRPLPH

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11796; Mature: 11796

Theoretical pI: Translated: 12.55; Mature: 12.55

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSEGDPIQRRLFQAALELLAERGYRGATTREIARRAGVSEVTLFRHFGSHLHPRADP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
GAGRLRNLRLRLPRHLPLRLRLPHRGHTPLLPGPLLPGPRPLPH
CCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLLSEGDPIQRRLFQAALELLAERGYRGATTREIARRAGVSEVTLFRHFGSHLHPRADP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
GAGRLRNLRLRLPRHLPLRLRLPHRGHTPLLPGPLLPGPRPLPH
CCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA