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The map label for this gene is 55980973

Identifier: 55980973

GI number: 55980973

Start: 950223

End: 951479

Strand: Direct

Name: 55980973

Synonym: TTHA1004

Alternate gene names: NA

Gene position: 950223-951479 (Clockwise)

Preceding gene: 55980972

Following gene: 55980974

Centisome position: 51.37

GC content: 71.12

Gene sequence:

>1257_bases
TTGCGCAAGGTGTGGTGGATCCTTTTCCTCTCGTCCGCCCTGGCCCAGGGCGCGGAACTGGCCTCTTGGGTGCGGGAAAG
CCCGGGCTACGCGGCCCTAAGGGCCCAACGCGCGGAGGCGGCGCTCGCCCTGGAGGCGGCCCGGGCCGGCCTTCTGCCCA
CCCTCGCCCCCCAGGTGGACTACGCCAAGACAAGCCTTTCCGAAAACCTCTCCCTAGGCCTTGGGGGAAGCCTCGCCGTC
CTACCCTGGAGCGACGCCCAGGACGCCTTGGCCGCAGCAGCGCGGGCGCTAAAGCAGGCGGACCTGGAACTCAAGGCAGA
GGGGAACGCCCTCTTCCTGGAGGCCTTGGGCCGCTACCTCGAGGCCTGGCTGGCCGAGCTGGACCTGGCCCTGGCCGAGA
AACGGGTGGCCCTAAACGAGGCCCAGCTCGCCGCGGCCAAAGCCCAGGAGGCCCAGGGACAGGCCACCTTCAAGGACGTG
CTGGAGGCGGAAAGCGCCCTGGCGGAAGCGAAGGCGAGCCTCTTCGCCGCCCAGAACGCCCGGGCGCTGGCCTCGGCCCG
GCTGGAAAGGATCCTGGGGCGGGCGGTGGCCCCGAAAGCCCTCCCCCTTCCCCAGGACCCCCCGAGCCTGGAAGAGGCTT
TGGCCGCCCTGGAGAACCGCCCTGACGTCGCCCTGGCCAGGCTCCGGCTGGAGGAGGCCGAGGCGGCCCTGGCCCAGGCC
TCCAGGGACCGGGCCCTTCCCCAGGGAAGCTTTTCCCTGAGCCTGGCCCAAGGCGGCTTGGACCTCAGCCTCAGCCTGGA
CCTGGGGGCGGGCGCCCTGGGCTACGCCCTGGGGTACACCGCCTTGGGCGCCGCCGAGGGCACGAGCCTCCGCGCCGGGG
CCAGCCTTCCCCTCTTCGCGCCCGTCCAGGAGGCGAACCAAAAGGTCCTGGAAAACCGCGTGGCCCAGGCCAAGCTCGCC
CTGGAAGCGGCCCTGAAGGACGGGGAGCTGGACCTCAGGCAGAAGCACCAGGCCCGGCTCCTCGCCGAAGCGCAGCTCGC
CGCCGCGGAAACGTCCCTCAAGGCGGCCGAGGCCTCCTTGGAAACGGCGAAGAAGCGGCTTCAGGCGGGGACGGGGACCC
GGCTCGAGGTCCTCCAGGCCGAGGTGGGCCTCCTCCAAGCGCAAAGGACCCTGGAGCAGGCGAAGGCGAACCTCCTCCAG
GCCCACTACGCCCTCATGGACGCCATGGGAATAGACCTTTTGGGAGGTGAACGGTGA

Upstream 100 bases:

>100_bases
GTTCCCCGCAAGCCCACCGGGCTCACGGCCCGCCTCCTCCTGCCGGCTAACCCCCGGCTAACGGGGACGCCCTAGCCTTG
GGCAGCGAGGAGGTGGTCGT

Downstream 100 bases:

>100_bases
AGCGTTGGTGGCTTTTCTTGTTTTTCGGACTGGCCCTGGCCCAAGGCGCCCTGGACGCGAGGGAGGCGCTCCGCCTCGCC
CTCGCGCAAAACCCCACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MRKVWWILFLSSALAQGAELASWVRESPGYAALRAQRAEAALALEAARAGLLPTLAPQVDYAKTSLSENLSLGLGGSLAV
LPWSDAQDALAAAARALKQADLELKAEGNALFLEALGRYLEAWLAELDLALAEKRVALNEAQLAAAKAQEAQGQATFKDV
LEAESALAEAKASLFAAQNARALASARLERILGRAVAPKALPLPQDPPSLEEALAALENRPDVALARLRLEEAEAALAQA
SRDRALPQGSFSLSLAQGGLDLSLSLDLGAGALGYALGYTALGAAEGTSLRAGASLPLFAPVQEANQKVLENRVAQAKLA
LEAALKDGELDLRQKHQARLLAEAQLAAAETSLKAAEASLETAKKRLQAGTGTRLEVLQAEVGLLQAQRTLEQAKANLLQ
AHYALMDAMGIDLLGGER

Sequences:

>Translated_418_residues
MRKVWWILFLSSALAQGAELASWVRESPGYAALRAQRAEAALALEAARAGLLPTLAPQVDYAKTSLSENLSLGLGGSLAV
LPWSDAQDALAAAARALKQADLELKAEGNALFLEALGRYLEAWLAELDLALAEKRVALNEAQLAAAKAQEAQGQATFKDV
LEAESALAEAKASLFAAQNARALASARLERILGRAVAPKALPLPQDPPSLEEALAALENRPDVALARLRLEEAEAALAQA
SRDRALPQGSFSLSLAQGGLDLSLSLDLGAGALGYALGYTALGAAEGTSLRAGASLPLFAPVQEANQKVLENRVAQAKLA
LEAALKDGELDLRQKHQARLLAEAQLAAAETSLKAAEASLETAKKRLQAGTGTRLEVLQAEVGLLQAQRTLEQAKANLLQ
AHYALMDAMGIDLLGGER
>Mature_418_residues
MRKVWWILFLSSALAQGAELASWVRESPGYAALRAQRAEAALALEAARAGLLPTLAPQVDYAKTSLSENLSLGLGGSLAV
LPWSDAQDALAAAARALKQADLELKAEGNALFLEALGRYLEAWLAELDLALAEKRVALNEAQLAAAKAQEAQGQATFKDV
LEAESALAEAKASLFAAQNARALASARLERILGRAVAPKALPLPQDPPSLEEALAALENRPDVALARLRLEEAEAALAQA
SRDRALPQGSFSLSLAQGGLDLSLSLDLGAGALGYALGYTALGAAEGTSLRAGASLPLFAPVQEANQKVLENRVAQAKLA
LEAALKDGELDLRQKHQARLLAEAQLAAAETSLKAAEASLETAKKRLQAGTGTRLEVLQAEVGLLQAQRTLEQAKANLLQ
AHYALMDAMGIDLLGGER

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43829; Mature: 43829

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVWWILFLSSALAQGAELASWVRESPGYAALRAQRAEAALALEAARAGLLPTLAPQVD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
YAKTSLSENLSLGLGGSLAVLPWSDAQDALAAAARALKQADLELKAEGNALFLEALGRYL
HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
EAWLAELDLALAEKRVALNEAQLAAAKAQEAQGQATFKDVLEAESALAEAKASLFAAQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RALASARLERILGRAVAPKALPLPQDPPSLEEALAALENRPDVALARLRLEEAEAALAQA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRDRALPQGSFSLSLAQGGLDLSLSLDLGAGALGYALGYTALGAAEGTSLRAGASLPLFA
HHHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PVQEANQKVLENRVAQAKLALEAALKDGELDLRQKHQARLLAEAQLAAAETSLKAAEASL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETAKKRLQAGTGTRLEVLQAEVGLLQAQRTLEQAKANLLQAHYALMDAMGIDLLGGER
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKVWWILFLSSALAQGAELASWVRESPGYAALRAQRAEAALALEAARAGLLPTLAPQVD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
YAKTSLSENLSLGLGGSLAVLPWSDAQDALAAAARALKQADLELKAEGNALFLEALGRYL
HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
EAWLAELDLALAEKRVALNEAQLAAAKAQEAQGQATFKDVLEAESALAEAKASLFAAQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RALASARLERILGRAVAPKALPLPQDPPSLEEALAALENRPDVALARLRLEEAEAALAQA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRDRALPQGSFSLSLAQGGLDLSLSLDLGAGALGYALGYTALGAAEGTSLRAGASLPLFA
HHHHCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PVQEANQKVLENRVAQAKLALEAALKDGELDLRQKHQARLLAEAQLAAAETSLKAAEASL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETAKKRLQAGTGTRLEVLQAEVGLLQAQRTLEQAKANLLQAHYALMDAMGIDLLGGER
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA