BacMap

Definition	Thermus thermophilus HB8 chromosome, complete genome.
Accession	NC_006461
Length	1,849,742

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The map label for this gene is gabD [H]

Identifier: 55980965

GI number: 55980965

Start: 940491

End: 941918

Strand: Reverse

Name: gabD [H]

Synonym: TTHA0996

Alternate gene names: 55980965

Gene position: 941918-940491 (Counterclockwise)

Preceding gene: 55980967

Following gene: 55980961

Centisome position: 50.92

GC content: 70.66

Gene sequence:

>1428_bases
ATGGAGGTCAAGGAAGCACCCACGGAGGCCCTCATCGGCGGGGCGTGGCGGCGCTTGGCGCGGAGGTTCCCCGTGGTCTC
TCCGGCCACGGGGGAGCGGGTGGCCGAGGTGGCGGACTGCGGGGAGGAGGAGGCGCGGGAGGCCTTGGAGGAGGCGGTTT
TGGCCTTCCCCGCCTGGAGCCGGGCCACGGCCTACGAACGGGCCCAGGTCCTCAGGCGCTGGTACGAGCGCATCCTAGAG
CACAAGGAGCCCCTCGCCCGGCTCATGGCCCTGGAGATGGGGAAGCCCCTCAAGGAGGGGAGGGCCGAGGTGGCCTACGC
CGCGGGGTTCGTGGAGTGGTACGCCGAGGAGGCGAAGCGGGTCTACGGGGAGACGGTCCCCTCCCAGTTTCCCCACAAGC
GGATCCTGGTGCGCTACGAGCCCGTGGGGCCGGTCTACGGCATCACCCCCTGGAACTTCCCCGCGGCCATGGTGACCCGC
AAGGTGGCCCCGGCCTTGGCGGCGGGGTGCACCTTCGTGCTGAAGCCCGCGGAGGAGAGCCCCCTCACCGCCCTCTACCT
GGCCAAGCTCTTCCTGGAGGCGGGGGGCCCCCCTGGGGTCTTCCAGGTCCTCCCCACCTCCAGGCCCGCCGAGGTCTCCC
GCCCCTTCCTGGAGGACGAAAGGGTCCGCAAGCTCACCTTCACGGGGAGCACCGAGGTGGGGGTGAGGCTCTACGAGGAG
GCGGCCAAGACCCTGAAGCGGGTCTCCTTGGAGCTTGGGGGCGGGGCGCCCGTTTTGGTCTTCGCCGACGCCGACCTGGA
TAGGGCGGTGGAGGAGACGCTTCGGGCCAAGTTCCGCAACGCTGGGGAGTCCTGCGTGGCCGCCAACCGGATCTTCGTCC
AGGCGGAGGTGGCCGAGGCCTTCGCCGAGGCCTACGCCCGGAGGGTCCAGGCCCTGAAGGTGGGGGACCCCCTCTCGGAG
GAGACGGACATCGGCCCCCTGGTGAACGAGGCTGCCCTTAGGAAGGTGCGGACCCACGTGGAGGACGCCCTCGCCAAGGG
GGCGAGGCTCGTGGCGGGAGGGGAGGCCAAGGGGCTCTTCTTCGCCCCCACGGTGCTTTTAGACGTGAAGCCGGAGAGCC
TCCTCTTCCGGGAGGAGACCTTTGGCCCGGTGGCCCCCCTCACCGTTTTCCGGGAGGAGGAGGAGGCGGTGCGCTGGGCC
AACGGCTTCCCCGTGGGGCTTGCCGCCTACGTCTTCACCCGGGACCTCTCCCGGGCCTTCCGGGTGGCGGAGGCCCTGGA
GTACGGCATCGTGGGGGTGAACGACGGCGTGCCCTCCACCCCGCAGGCCCCCTTTGGCGGCGTGAAGCGCTCGGGGCTCG
GCCGGGAAGGGGGGAAGTGGGGCCTTTTGGAGTACCTAGAGGTGAAGTACGTGTCCTTTGGCCTCTGA

Upstream 100 bases:

>100_bases
CCCGGGGAGGTGGTCCTCAGGGCCTTTTTCCCCCTAAGGTCTTCCGGATCTAAGGGGCCGCGTTACGGTGGGGGGCGCTT
TCCTCGGGTAGGCTTAAGGT

Downstream 100 bases:

>100_bases
GGCCCCGCGCCGGAGGCCCGACCGCAAGGCCCGCACCGCCTCGAGGGCGAGCCTCCCCTCCCGGGCCTCCCGCTCCAGGG
CCTCCAGGGCTTCCTCGGGC

Product: succinate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MEVKEAPTEALIGGAWRRLARRFPVVSPATGERVAEVADCGEEEAREALEEAVLAFPAWSRATAYERAQVLRRWYERILE
HKEPLARLMALEMGKPLKEGRAEVAYAAGFVEWYAEEAKRVYGETVPSQFPHKRILVRYEPVGPVYGITPWNFPAAMVTR
KVAPALAAGCTFVLKPAEESPLTALYLAKLFLEAGGPPGVFQVLPTSRPAEVSRPFLEDERVRKLTFTGSTEVGVRLYEE
AAKTLKRVSLELGGGAPVLVFADADLDRAVEETLRAKFRNAGESCVAANRIFVQAEVAEAFAEAYARRVQALKVGDPLSE
ETDIGPLVNEAALRKVRTHVEDALAKGARLVAGGEAKGLFFAPTVLLDVKPESLLFREETFGPVAPLTVFREEEEAVRWA
NGFPVGLAAYVFTRDLSRAFRVAEALEYGIVGVNDGVPSTPQAPFGGVKRSGLGREGGKWGLLEYLEVKYVSFGL

Sequences:

>Translated_475_residues
MEVKEAPTEALIGGAWRRLARRFPVVSPATGERVAEVADCGEEEAREALEEAVLAFPAWSRATAYERAQVLRRWYERILE
HKEPLARLMALEMGKPLKEGRAEVAYAAGFVEWYAEEAKRVYGETVPSQFPHKRILVRYEPVGPVYGITPWNFPAAMVTR
KVAPALAAGCTFVLKPAEESPLTALYLAKLFLEAGGPPGVFQVLPTSRPAEVSRPFLEDERVRKLTFTGSTEVGVRLYEE
AAKTLKRVSLELGGGAPVLVFADADLDRAVEETLRAKFRNAGESCVAANRIFVQAEVAEAFAEAYARRVQALKVGDPLSE
ETDIGPLVNEAALRKVRTHVEDALAKGARLVAGGEAKGLFFAPTVLLDVKPESLLFREETFGPVAPLTVFREEEEAVRWA
NGFPVGLAAYVFTRDLSRAFRVAEALEYGIVGVNDGVPSTPQAPFGGVKRSGLGREGGKWGLLEYLEVKYVSFGL
>Mature_475_residues
MEVKEAPTEALIGGAWRRLARRFPVVSPATGERVAEVADCGEEEAREALEEAVLAFPAWSRATAYERAQVLRRWYERILE
HKEPLARLMALEMGKPLKEGRAEVAYAAGFVEWYAEEAKRVYGETVPSQFPHKRILVRYEPVGPVYGITPWNFPAAMVTR
KVAPALAAGCTFVLKPAEESPLTALYLAKLFLEAGGPPGVFQVLPTSRPAEVSRPFLEDERVRKLTFTGSTEVGVRLYEE
AAKTLKRVSLELGGGAPVLVFADADLDRAVEETLRAKFRNAGESCVAANRIFVQAEVAEAFAEAYARRVQALKVGDPLSE
ETDIGPLVNEAALRKVRTHVEDALAKGARLVAGGEAKGLFFAPTVLLDVKPESLLFREETFGPVAPLTVFREEEEAVRWA
NGFPVGLAAYVFTRDLSRAFRVAEALEYGIVGVNDGVPSTPQAPFGGVKRSGLGREGGKWGLLEYLEVKYVSFGL

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=473, Percent_Identity=48.8372093023256, Blast_Score=431, Evalue=1e-120,
Organism=Homo sapiens, GI25777721, Length=486, Percent_Identity=47.3251028806584, Blast_Score=420, Evalue=1e-117,
Organism=Homo sapiens, GI153266822, Length=478, Percent_Identity=39.1213389121339, Blast_Score=317, Evalue=1e-86,
Organism=Homo sapiens, GI25777724, Length=476, Percent_Identity=39.0756302521008, Blast_Score=316, Evalue=3e-86,
Organism=Homo sapiens, GI25777732, Length=479, Percent_Identity=39.2484342379958, Blast_Score=305, Evalue=6e-83,
Organism=Homo sapiens, GI25777730, Length=477, Percent_Identity=39.832285115304, Blast_Score=305, Evalue=8e-83,
Organism=Homo sapiens, GI115387104, Length=455, Percent_Identity=36.4835164835165, Blast_Score=295, Evalue=5e-80,
Organism=Homo sapiens, GI21361176, Length=481, Percent_Identity=36.5904365904366, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI21614513, Length=481, Percent_Identity=37.006237006237, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI25777728, Length=415, Percent_Identity=39.5180722891566, Blast_Score=283, Evalue=3e-76,
Organism=Homo sapiens, GI238814322, Length=483, Percent_Identity=35.4037267080745, Blast_Score=281, Evalue=1e-75,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=35.5042016806723, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI12007648, Length=478, Percent_Identity=34.7280334728033, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI25952152, Length=468, Percent_Identity=31.8376068376068, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI310128103, Length=470, Percent_Identity=29.5744680851064, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI188035924, Length=470, Percent_Identity=29.5744680851064, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI310128093, Length=463, Percent_Identity=29.5896328293737, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI11095441, Length=481, Percent_Identity=28.4823284823285, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI301500698, Length=283, Percent_Identity=37.8091872791519, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI310128091, Length=463, Percent_Identity=28.5097192224622, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI206597441, Length=355, Percent_Identity=31.5492957746479, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI206597439, Length=355, Percent_Identity=31.5492957746479, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI22907049, Length=355, Percent_Identity=31.5492957746479, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI223972651, Length=485, Percent_Identity=30.1030927835052, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI4557303, Length=328, Percent_Identity=31.0975609756098, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI73466520, Length=325, Percent_Identity=31.3846153846154, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI4502043, Length=416, Percent_Identity=30.5288461538462, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI238814371, Length=416, Percent_Identity=30.5288461538462, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI310128089, Length=328, Percent_Identity=30.4878048780488, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI73695881, Length=330, Percent_Identity=31.2121212121212, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI73695879, Length=330, Percent_Identity=31.2121212121212, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI310128087, Length=467, Percent_Identity=26.9807280513919, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI71773324, Length=331, Percent_Identity=32.02416918429, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=32.8125, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI310128095, Length=304, Percent_Identity=29.2763157894737, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI223972653, Length=489, Percent_Identity=28.2208588957055, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI25777736, Length=457, Percent_Identity=25.601750547046, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI25777734, Length=457, Percent_Identity=25.601750547046, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI238859541, Length=457, Percent_Identity=25.601750547046, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI310128099, Length=230, Percent_Identity=29.1304347826087, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI310128101, Length=230, Percent_Identity=29.1304347826087, Blast_Score=95, Evalue=2e-19,
Organism=Escherichia coli, GI1789015, Length=472, Percent_Identity=52.9661016949153, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI1787684, Length=464, Percent_Identity=37.2844827586207, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI87081926, Length=449, Percent_Identity=36.7483296213808, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI87081896, Length=463, Percent_Identity=37.1490280777538, Blast_Score=278, Evalue=5e-76,
Organism=Escherichia coli, GI1786504, Length=460, Percent_Identity=37.1739130434783, Blast_Score=274, Evalue=8e-75,
Organism=Escherichia coli, GI1787715, Length=453, Percent_Identity=36.8653421633554, Blast_Score=268, Evalue=6e-73,
Organism=Escherichia coli, GI1787558, Length=460, Percent_Identity=37.1739130434783, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI87082295, Length=489, Percent_Identity=33.1288343558282, Blast_Score=231, Evalue=7e-62,
Organism=Escherichia coli, GI1787250, Length=456, Percent_Identity=30.7017543859649, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1788042, Length=440, Percent_Identity=29.7727272727273, Blast_Score=153, Evalue=3e-38,
Organism=Escherichia coli, GI1787653, Length=456, Percent_Identity=25.6578947368421, Blast_Score=93, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=43.8709677419355, Blast_Score=374, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI133930964, Length=487, Percent_Identity=38.6036960985626, Blast_Score=301, Evalue=7e-82,
Organism=Caenorhabditis elegans, GI17562198, Length=467, Percent_Identity=37.9014989293362, Blast_Score=289, Evalue=2e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=462, Percent_Identity=34.4155844155844, Blast_Score=281, Evalue=8e-76,
Organism=Caenorhabditis elegans, GI25143874, Length=462, Percent_Identity=34.4155844155844, Blast_Score=280, Evalue=1e-75,
Organism=Caenorhabditis elegans, GI25144435, Length=464, Percent_Identity=35.9913793103448, Blast_Score=271, Evalue=6e-73,
Organism=Caenorhabditis elegans, GI32564736, Length=415, Percent_Identity=37.1084337349398, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI71995606, Length=462, Percent_Identity=35.4978354978355, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17551164, Length=484, Percent_Identity=31.6115702479339, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=404, Percent_Identity=35.3960396039604, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI115534176, Length=467, Percent_Identity=30.406852248394, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71986308, Length=458, Percent_Identity=29.0393013100437, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17564084, Length=386, Percent_Identity=30.3108808290155, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25146391, Length=341, Percent_Identity=30.4985337243402, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI32566756, Length=341, Percent_Identity=30.4985337243402, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25146394, Length=341, Percent_Identity=30.4985337243402, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17534447, Length=439, Percent_Identity=25.5125284738041, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI115532534, Length=334, Percent_Identity=26.6467065868263, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI32564151, Length=400, Percent_Identity=25.25, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71990744, Length=285, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319478, Length=469, Percent_Identity=43.4968017057569, Blast_Score=390, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6320917, Length=477, Percent_Identity=36.8972746331237, Blast_Score=299, Evalue=8e-82,
Organism=Saccharomyces cerevisiae, GI6324950, Length=474, Percent_Identity=35.2320675105485, Blast_Score=293, Evalue=4e-80,
Organism=Saccharomyces cerevisiae, GI6323821, Length=471, Percent_Identity=34.8195329087049, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6323822, Length=471, Percent_Identity=33.9702760084926, Blast_Score=264, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6325196, Length=481, Percent_Identity=34.0956340956341, Blast_Score=261, Evalue=1e-70,
Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=28.9308176100629, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6321826, Length=475, Percent_Identity=26.5263157894737, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6323757, Length=405, Percent_Identity=26.4197530864197, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281362580, Length=475, Percent_Identity=46.7368421052632, Blast_Score=450, Evalue=1e-127,
Organism=Drosophila melanogaster, GI62472918, Length=475, Percent_Identity=46.7368421052632, Blast_Score=450, Evalue=1e-127,
Organism=Drosophila melanogaster, GI62472926, Length=475, Percent_Identity=46.7368421052632, Blast_Score=450, Evalue=1e-127,
Organism=Drosophila melanogaster, GI62472936, Length=475, Percent_Identity=46.7368421052632, Blast_Score=450, Evalue=1e-127,
Organism=Drosophila melanogaster, GI21356737, Length=475, Percent_Identity=46.7368421052632, Blast_Score=450, Evalue=1e-127,
Organism=Drosophila melanogaster, GI24650465, Length=468, Percent_Identity=38.6752136752137, Blast_Score=298, Evalue=6e-81,
Organism=Drosophila melanogaster, GI20129399, Length=478, Percent_Identity=38.7029288702929, Blast_Score=293, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24585660, Length=480, Percent_Identity=34.375, Blast_Score=277, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24666674, Length=467, Percent_Identity=26.7665952890792, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24638878, Length=460, Percent_Identity=30.2173913043478, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24638876, Length=460, Percent_Identity=30.2173913043478, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI281360301, Length=437, Percent_Identity=28.1464530892449, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI281360299, Length=430, Percent_Identity=28.3720930232558, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI281360297, Length=430, Percent_Identity=28.3720930232558, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI281360295, Length=430, Percent_Identity=28.3720930232558, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24586250, Length=430, Percent_Identity=28.3720930232558, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI45552499, Length=432, Percent_Identity=28.4722222222222, Blast_Score=148, Evalue=7e-36,
Organism=Drosophila melanogaster, GI281360303, Length=439, Percent_Identity=28.246013667426, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24668425, Length=474, Percent_Identity=22.5738396624473, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668417, Length=474, Percent_Identity=22.5738396624473, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668413, Length=474, Percent_Identity=22.5738396624473, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281360293, Length=262, Percent_Identity=28.2442748091603, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28574525, Length=457, Percent_Identity=23.1947483588621, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571806, Length=346, Percent_Identity=25.1445086705202, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571802, Length=346, Percent_Identity=25.1445086705202, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571800, Length=346, Percent_Identity=25.1445086705202, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571798, Length=346, Percent_Identity=25.1445086705202, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28571796, Length=346, Percent_Identity=25.1445086705202, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28571794, Length=346, Percent_Identity=25.1445086705202, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52009; Mature: 52009

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKEAPTEALIGGAWRRLARRFPVVSPATGERVAEVADCGEEEAREALEEAVLAFPAWS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
RATAYERAQVLRRWYERILEHKEPLARLMALEMGKPLKEGRAEVAYAAGFVEWYAEEAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VYGETVPSQFPHKRILVRYEPVGPVYGITPWNFPAAMVTRKVAPALAAGCTFVLKPAEES
HHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC
PLTALYLAKLFLEAGGPPGVFQVLPTSRPAEVSRPFLEDERVRKLTFTGSTEVGVRLYEE
CHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEEECCCCHHHHHHHHH
AAKTLKRVSLELGGGAPVLVFADADLDRAVEETLRAKFRNAGESCVAANRIFVQAEVAEA
HHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHH
FAEAYARRVQALKVGDPLSEETDIGPLVNEAALRKVRTHVEDALAKGARLVAGGEAKGLF
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
FAPTVLLDVKPESLLFREETFGPVAPLTVFREEEEAVRWANGFPVGLAAYVFTRDLSRAF
EECEEEEECCCHHHEEEHHCCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RVAEALEYGIVGVNDGVPSTPQAPFGGVKRSGLGREGGKWGLLEYLEVKYVSFGL
HHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVKEAPTEALIGGAWRRLARRFPVVSPATGERVAEVADCGEEEAREALEEAVLAFPAWS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
RATAYERAQVLRRWYERILEHKEPLARLMALEMGKPLKEGRAEVAYAAGFVEWYAEEAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VYGETVPSQFPHKRILVRYEPVGPVYGITPWNFPAAMVTRKVAPALAAGCTFVLKPAEES
HHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC
PLTALYLAKLFLEAGGPPGVFQVLPTSRPAEVSRPFLEDERVRKLTFTGSTEVGVRLYEE
CHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEEECCCCHHHHHHHHH
AAKTLKRVSLELGGGAPVLVFADADLDRAVEETLRAKFRNAGESCVAANRIFVQAEVAEA
HHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHH
FAEAYARRVQALKVGDPLSEETDIGPLVNEAALRKVRTHVEDALAKGARLVAGGEAKGLF
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
FAPTVLLDVKPESLLFREETFGPVAPLTVFREEEEAVRWANGFPVGLAAYVFTRDLSRAF
EECEEEEECCCHHHEEEHHCCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RVAEALEYGIVGVNDGVPSTPQAPFGGVKRSGLGREGGKWGLLEYLEVKYVSFGL
HHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]