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The map label for this gene is ycjP [C]

Identifier: 55980945

GI number: 55980945

Start: 919540

End: 920337

Strand: Reverse

Name: ycjP [C]

Synonym: TTHA0976

Alternate gene names: 55980945

Gene position: 920337-919540 (Counterclockwise)

Preceding gene: 55980946

Following gene: 55980944

Centisome position: 49.75

GC content: 67.79

Gene sequence:

>798_bases
ATGAGCCGGGTATGGCCCTGGCTTCTCGCCCTCGTCTTCACCTTCTGGGTGCTCCTTCCCATCTACCTCATCGCCCTGAG
CGCCTTCGCTCCCAGGGAGGCGGTCTACGCCTGGCCCAAGGCCTTGTGGCCCCGGGAGGTCTCCTTGGACACCCTGCGCT
TCTTCTTCGGGGTGGAGGGGGTCTGGCGGGCCACGGCCACGAGCCTCGCCGTGGCGGGCCTCACCATGCTCTTCAGCCTC
CTCCTGGGGGCGCCCGCGGGGTACGCCCTCGCCCGCTACCCCTTCTTCGGGCGGGACCTGTTCCGGGTCTTCCTCATCCT
GACCCGCGCCTTTCCCATCGTGGTCCTGGCCCTGCCCCTCGCCGTCCTCTTCCTGCGGGTGGGGCTTTACGACACCCCCT
TGGGGGTGGCCCTGGTGCACACCGCCCTCACCCTGCCCTTCTCGGTGATGGTGAGCGCAAGCCTCTTTCTCTCCATCCCG
AAGGAGCTGGAGGAGGCCGCCTGGACCCTGGGGTGCACCCGGAGCCAGGCCTTCCTCAAGGTGGTCTTGCCCCTCGCCCT
GCCGGGCCTCGCCGCCACCGCCATCTTCGCCTTCATCACCTCCTGGAACGAGGTCTTCGCCGCAAGCGTCCTCACCCTGC
AGAACAAGACGCTCACGGCCTTCCTCCTCTCCCTCTTGGACGAGTCGCCCCTGCCCTTTAAGTTCGCCGGAGGGTTCTTC
CTGGTGGTGCCCGCCTTGGTCTTCATCTTCGCCGTGCGGCGCTACCTCTTCACCCTCTGGGGCATCGCGAGCCGCTAG

Upstream 100 bases:

>100_bases
CGGGGGTGGCGGCGGCCTACGCCGTCCTCATCCTCCTCGTCTCCGTGGCCGCCACCCTCTTTTACCTCCGGGCCCTCCGC
GTCCGGGAGGAGGTGTACGG

Downstream 100 bases:

>100_bases
GAGGGCATCATGGCCGGGATCCGCGTGGAAAAGGTCAGCAAGCGCTTCGGCAAGGTGGAGGCCTTGAAGGGGGTGGACCT
CGAGGTCCGGGACCAGGAGT

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSRVWPWLLALVFTFWVLLPIYLIALSAFAPREAVYAWPKALWPREVSLDTLRFFFGVEGVWRATATSLAVAGLTMLFSL
LLGAPAGYALARYPFFGRDLFRVFLILTRAFPIVVLALPLAVLFLRVGLYDTPLGVALVHTALTLPFSVMVSASLFLSIP
KELEEAAWTLGCTRSQAFLKVVLPLALPGLAATAIFAFITSWNEVFAASVLTLQNKTLTAFLLSLLDESPLPFKFAGGFF
LVVPALVFIFAVRRYLFTLWGIASR

Sequences:

>Translated_265_residues
MSRVWPWLLALVFTFWVLLPIYLIALSAFAPREAVYAWPKALWPREVSLDTLRFFFGVEGVWRATATSLAVAGLTMLFSL
LLGAPAGYALARYPFFGRDLFRVFLILTRAFPIVVLALPLAVLFLRVGLYDTPLGVALVHTALTLPFSVMVSASLFLSIP
KELEEAAWTLGCTRSQAFLKVVLPLALPGLAATAIFAFITSWNEVFAASVLTLQNKTLTAFLLSLLDESPLPFKFAGGFF
LVVPALVFIFAVRRYLFTLWGIASR
>Mature_264_residues
SRVWPWLLALVFTFWVLLPIYLIALSAFAPREAVYAWPKALWPREVSLDTLRFFFGVEGVWRATATSLAVAGLTMLFSLL
LGAPAGYALARYPFFGRDLFRVFLILTRAFPIVVLALPLAVLFLRVGLYDTPLGVALVHTALTLPFSVMVSASLFLSIPK
ELEEAAWTLGCTRSQAFLKVVLPLALPGLAATAIFAFITSWNEVFAASVLTLQNKTLTAFLLSLLDESPLPFKFAGGFFL
VVPALVFIFAVRRYLFTLWGIASR

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=215, Percent_Identity=28.3720930232558, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1788764, Length=172, Percent_Identity=31.9767441860465, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787368, Length=154, Percent_Identity=29.8701298701299, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789860, Length=200, Percent_Identity=27, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29330; Mature: 29199

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVWPWLLALVFTFWVLLPIYLIALSAFAPREAVYAWPKALWPREVSLDTLRFFFGVEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
VWRATATSLAVAGLTMLFSLLLGAPAGYALARYPFFGRDLFRVFLILTRAFPIVVLALPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVLFLRVGLYDTPLGVALVHTALTLPFSVMVSASLFLSIPKELEEAAWTLGCTRSQAFLK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLPLALPGLAATAIFAFITSWNEVFAASVLTLQNKTLTAFLLSLLDESPLPFKFAGGFF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCHHH
LVVPALVFIFAVRRYLFTLWGIASR
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVWPWLLALVFTFWVLLPIYLIALSAFAPREAVYAWPKALWPREVSLDTLRFFFGVEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCH
VWRATATSLAVAGLTMLFSLLLGAPAGYALARYPFFGRDLFRVFLILTRAFPIVVLALPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVLFLRVGLYDTPLGVALVHTALTLPFSVMVSASLFLSIPKELEEAAWTLGCTRSQAFLK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLPLALPGLAATAIFAFITSWNEVFAASVLTLQNKTLTAFLLSLLDESPLPFKFAGGFF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCHHH
LVVPALVFIFAVRRYLFTLWGIASR
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]