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The map label for this gene is 55980838

Identifier: 55980838

GI number: 55980838

Start: 829057

End: 829767

Strand: Direct

Name: 55980838

Synonym: TTHA0869

Alternate gene names: NA

Gene position: 829057-829767 (Clockwise)

Preceding gene: 55980835

Following gene: 55980847

Centisome position: 44.82

GC content: 70.89

Gene sequence:

>711_bases
TTGGGCCGAGGGGCAAGCCGGTGTAGACTGGCCTTCGTGAACCTCATGGCCGTCTTTGCCCACCCGGACGACGAGATCGG
GGCGGCCGGCACCCTCGCCCTCCACGCCCAGAAGGGGGACCGGGTGATGCTCGTCTGGATGACCCGGGGGGAGCTTGCCA
GCCAGTTCGGGGATACGCCGGAGGAGGAGGTGGCCCGGGTGCGGGAGGGGCACGGGGCCTACGTGGCGGGGCTCATCGGG
GCCGAGCACCGCTTTTTGCCCTTCCAGGACACCTTCCTCACCGGTGGCCGGGAGGAGGCCCTGGCCCTGGCCCGGCTCAT
GGCCGAGTTCCGTCCGGACGCCGTGGTCACCTGGGACCCCATGGACGTCCACCCGGACCACCGGGCCACCCACCGGGCGG
TGCTTTCCGCCCTGAAGCTCTGCCGCATCCCCAAACTCGTGGGAGAGGCCCACAGGAAGCCCGTGCGCCTCTTCCACTAC
CCCCGGGAGGACCTCGCGCGGCCCTGGGTCTACGTGGACACCACCCCCACCCAGGAGGTGGCGGAGGCGGTCTTCAGCTT
CTACCAGGCGTTCTACCGCTGGCCCTTCACCCTCGAGGACTTCCGGGCCCGGAGGCGGCTTCTGGGCCAGAGGGCGGGGG
TGCGGTTTGCGGAGGCGTTTCAGACGGAGGCGCCGCTTGCCCTTCCGGGCCTAGGCTTTGGGCCTCGGTGA

Upstream 100 bases:

>100_bases
GTTCCCGGGTGGCCTGGTGGATGGCCTCCGGGGTGTCCTCTTCCACGGTGATGGCGCCGCGGATGCCCCGGACCATGGTT
ACGGCCTATCCTAAGGGGTT

Downstream 100 bases:

>100_bases
GGGCGTAGCTCACGAAGACCGCGGGGAGGACGAGGGGCAGGAGGGCGTAACCGCCCCACTCCGCCGCGAGGACGAGGGCG
GCGAAGGGGGCCCGGGCCAC

Product: LmbE-like protein

Products: NA

Alternate protein names: LmbE-Related Protein; LmbE-Like Protein Protein; LmbE-Like Protein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MGRGASRCRLAFVNLMAVFAHPDDEIGAAGTLALHAQKGDRVMLVWMTRGELASQFGDTPEEEVARVREGHGAYVAGLIG
AEHRFLPFQDTFLTGGREEALALARLMAEFRPDAVVTWDPMDVHPDHRATHRAVLSALKLCRIPKLVGEAHRKPVRLFHY
PREDLARPWVYVDTTPTQEVAEAVFSFYQAFYRWPFTLEDFRARRRLLGQRAGVRFAEAFQTEAPLALPGLGFGPR

Sequences:

>Translated_236_residues
MGRGASRCRLAFVNLMAVFAHPDDEIGAAGTLALHAQKGDRVMLVWMTRGELASQFGDTPEEEVARVREGHGAYVAGLIG
AEHRFLPFQDTFLTGGREEALALARLMAEFRPDAVVTWDPMDVHPDHRATHRAVLSALKLCRIPKLVGEAHRKPVRLFHY
PREDLARPWVYVDTTPTQEVAEAVFSFYQAFYRWPFTLEDFRARRRLLGQRAGVRFAEAFQTEAPLALPGLGFGPR
>Mature_235_residues
GRGASRCRLAFVNLMAVFAHPDDEIGAAGTLALHAQKGDRVMLVWMTRGELASQFGDTPEEEVARVREGHGAYVAGLIGA
EHRFLPFQDTFLTGGREEALALARLMAEFRPDAVVTWDPMDVHPDHRATHRAVLSALKLCRIPKLVGEAHRKPVRLFHYP
REDLARPWVYVDTTPTQEVAEAVFSFYQAFYRWPFTLEDFRARRRLLGQRAGVRFAEAFQTEAPLALPGLGFGPR

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26539; Mature: 26408

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGASRCRLAFVNLMAVFAHPDDEIGAAGTLALHAQKGDRVMLVWMTRGELASQFGDTP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCCC
EEEVARVREGHGAYVAGLIGAEHRFLPFQDTFLTGGREEALALARLMAEFRPDAVVTWDP
HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECC
MDVHPDHRATHRAVLSALKLCRIPKLVGEAHRKPVRLFHYPREDLARPWVYVDTTPTQEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCEEEEECCCHHHH
AEAVFSFYQAFYRWPFTLEDFRARRRLLGQRAGVRFAEAFQTEAPLALPGLGFGPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCCCC
>Mature Secondary Structure 
GRGASRCRLAFVNLMAVFAHPDDEIGAAGTLALHAQKGDRVMLVWMTRGELASQFGDTP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCCC
EEEVARVREGHGAYVAGLIGAEHRFLPFQDTFLTGGREEALALARLMAEFRPDAVVTWDP
HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECC
MDVHPDHRATHRAVLSALKLCRIPKLVGEAHRKPVRLFHYPREDLARPWVYVDTTPTQEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCEEEEECCCHHHH
AEAVFSFYQAFYRWPFTLEDFRARRRLLGQRAGVRFAEAFQTEAPLALPGLGFGPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA