| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is pkwA [H]
Identifier: 55980835
GI number: 55980835
Start: 826917
End: 828068
Strand: Direct
Name: pkwA [H]
Synonym: TTHA0866
Alternate gene names: 55980835
Gene position: 826917-828068 (Clockwise)
Preceding gene: 55980834
Following gene: 55980838
Centisome position: 44.7
GC content: 72.83
Gene sequence:
>1152_bases ATGAGGGCGCTGGGTCTCCTCTTCCTACTCCTTCCGGCCCTGGCCCAGAACCTGGCCCCGGCCTTTCAACTGGACTGCCG CTTCCGGGGGGAGGCCAGGCCCGCCCAGGTCTTCTGGGACGGGAGCCCCTTGGGGACCTGCCCCCTCGAGGTCCGGGCTG CTCCGGGCCGCCACCTTCTCCGCCTGCGCCTCGAGGAGCCCGGGGGGACCTACCTGGCCTACGAGGCCCGGGTGGAGGTG GGGGAGGGGGGCCTGGGGGCCTTCACCGCCGAACTCCTGCGCTATGACCCCCGGGGGGAGGCCCTGAAGGGGGGCAAGGG CTTGGTCTACGCCCTGGCCTACGGCCCCAAGGGGGTCTTGGCCCTGGGGGACGCGGCCGGGCAGGTCCGCCTCCTCCCCC CGGGCCGTCCCCCCTTGGACCTCAAGGGGCACGCCTCCTACGTGCGCGACCTGGCCTTTAGCCCCGACGGCCGCTACCTC GCCTCGGCCTCGGGGGATGGGACGGTGCGCCTGTACGAGGCCCAGGGCCGCTTCCTCCGGGCTTTGGGCAAGGGCCCGGC CTTCCTCAAGGTGGGCTTTGACGCCCAGGGCCGCCTCTTTGGCCTCCAGCTCCGGGGGAACCTCACCCTGTTTGACCCCG CCACGGGCAAGGTCCTGGCCGCCCGCCCCCTAAGCCCCTACCTCTTCTCCGCGGCCCAGAGCCCCGGGGGGAGGGTCCTC GCTTTGGGGCTTTCCGTGGGCCGGGTGGAGGTGTGGGACCTCGCCCTCCCGGGGAAGCGGAGGGAGGTCCGGGTCCCGGG AGGTCCCGTCTACGCCCTGGCCTTCAGCCCCGACGGCCGCTATCTCGCCGTGGGTTCGGCGGACGGGGGAGTGAGGCTTT TGGACCTCCTGGCCCCGGGCGGGCCCGAACCCCGGCTCCTCTACGCCCACAAGGACCTGCCCCTGGGCCTGGCCTTCAGC CCCGACGGCCGCTATTTGGCCTCCGGAGGGCAGGACCGGGAGGTGCGCCTCTACGACCTCGATGCGGGCCTTTTGGAGCG GGTTTACGTGGGGCATACCGGTGCGGTGTACGGGCTGGACTTTAACCCCCAAACCCCCGCCCTGGCCACGGGCGGGGGGG AGGGTCGGGTCCTCCTCTTCCGCCTTCCCTAG
Upstream 100 bases:
>100_bases CACGCTGTGAACGAGGAGTACTCGGGGAGGCTGCAGCTCGCCCAGATGGACACGGGCTACTGAGCCCCAAGACGCCTACG CCTTGGGAGGAGGTGTTGGG
Downstream 100 bases:
>100_bases GCTTATACCCTTGCTTCCGGTTTCCTTCACCCTACGGGCCCTAGGAGGCCCCTAGGAACCTTGCGCCAGGGCCCCCATGC TGGCGCAAGCCAGCATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRALGLLFLLLPALAQNLAPAFQLDCRFRGEARPAQVFWDGSPLGTCPLEVRAAPGRHLLRLRLEEPGGTYLAYEARVEV GEGGLGAFTAELLRYDPRGEALKGGKGLVYALAYGPKGVLALGDAAGQVRLLPPGRPPLDLKGHASYVRDLAFSPDGRYL ASASGDGTVRLYEAQGRFLRALGKGPAFLKVGFDAQGRLFGLQLRGNLTLFDPATGKVLAARPLSPYLFSAAQSPGGRVL ALGLSVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPGGPEPRLLYAHKDLPLGLAFS PDGRYLASGGQDREVRLYDLDAGLLERVYVGHTGAVYGLDFNPQTPALATGGGEGRVLLFRLP
Sequences:
>Translated_383_residues MRALGLLFLLLPALAQNLAPAFQLDCRFRGEARPAQVFWDGSPLGTCPLEVRAAPGRHLLRLRLEEPGGTYLAYEARVEV GEGGLGAFTAELLRYDPRGEALKGGKGLVYALAYGPKGVLALGDAAGQVRLLPPGRPPLDLKGHASYVRDLAFSPDGRYL ASASGDGTVRLYEAQGRFLRALGKGPAFLKVGFDAQGRLFGLQLRGNLTLFDPATGKVLAARPLSPYLFSAAQSPGGRVL ALGLSVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPGGPEPRLLYAHKDLPLGLAFS PDGRYLASGGQDREVRLYDLDAGLLERVYVGHTGAVYGLDFNPQTPALATGGGEGRVLLFRLP >Mature_383_residues MRALGLLFLLLPALAQNLAPAFQLDCRFRGEARPAQVFWDGSPLGTCPLEVRAAPGRHLLRLRLEEPGGTYLAYEARVEV GEGGLGAFTAELLRYDPRGEALKGGKGLVYALAYGPKGVLALGDAAGQVRLLPPGRPPLDLKGHASYVRDLAFSPDGRYL ASASGDGTVRLYEAQGRFLRALGKGPAFLKVGFDAQGRLFGLQLRGNLTLFDPATGKVLAARPLSPYLFSAAQSPGGRVL ALGLSVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPGGPEPRLLYAHKDLPLGLAFS PDGRYLASGGQDREVRLYDLDAGLLERVYVGHTGAVYGLDFNPQTPALATGGGEGRVLLFRLP
Specific function: May play a regulatory role during the complex growth cycle and in secondary metabolite production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI23199987, Length=278, Percent_Identity=26.6187050359712, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI16554629, Length=261, Percent_Identity=25.2873563218391, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI16554627, Length=261, Percent_Identity=25.2873563218391, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI239787760, Length=260, Percent_Identity=26.1538461538462, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI239787754, Length=265, Percent_Identity=25.6603773584906, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI239787764, Length=260, Percent_Identity=26.1538461538462, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI113865883, Length=153, Percent_Identity=36.6013071895425, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI32189425, Length=291, Percent_Identity=24.0549828178694, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI21071067, Length=216, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI26665869, Length=291, Percent_Identity=25.4295532646048, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI115298668, Length=305, Percent_Identity=25.2459016393443, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI7657439, Length=113, Percent_Identity=38.0530973451327, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI83779014, Length=224, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI20357529, Length=345, Percent_Identity=25.7971014492754, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI62234461, Length=376, Percent_Identity=26.3297872340426, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI24431950, Length=288, Percent_Identity=26.3888888888889, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI7657381, Length=260, Percent_Identity=28.0769230769231, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI13376840, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17552164, Length=250, Percent_Identity=24, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17568701, Length=250, Percent_Identity=24.8, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI72001544, Length=250, Percent_Identity=24.4, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17538129, Length=197, Percent_Identity=27.9187817258883, Blast_Score=71, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6319675, Length=255, Percent_Identity=28.2352941176471, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324322, Length=243, Percent_Identity=26.3374485596708, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319926, Length=262, Percent_Identity=24.8091603053435, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325435, Length=246, Percent_Identity=23.5772357723577, Blast_Score=76, Evalue=7e-15, Organism=Drosophila melanogaster, GI21356075, Length=251, Percent_Identity=29.8804780876494, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI17864654, Length=250, Percent_Identity=25.6, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24654584, Length=251, Percent_Identity=27.8884462151394, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI20129125, Length=299, Percent_Identity=24.4147157190635, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI24663767, Length=298, Percent_Identity=27.5167785234899, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI17136870, Length=257, Percent_Identity=27.2373540856031, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24639729, Length=176, Percent_Identity=30.6818181818182, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24639727, Length=176, Percent_Identity=30.6818181818182, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24649265, Length=245, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00069 Pkinase; PF00400 WD40 [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 40601; Mature: 40601
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALGLLFLLLPALAQNLAPAFQLDCRFRGEARPAQVFWDGSPLGTCPLEVRAAPGRHLL CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCEEE RLRLEEPGGTYLAYEARVEVGEGGLGAFTAELLRYDPRGEALKGGKGLVYALAYGPKGVL EEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCEE ALGDAAGQVRLLPPGRPPLDLKGHASYVRDLAFSPDGRYLASASGDGTVRLYEAQGRFLR EEECCCCEEEECCCCCCCCCCCCCHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCEEH ALGKGPAFLKVGFDAQGRLFGLQLRGNLTLFDPATGKVLAARPLSPYLFSAAQSPGGRVL HHCCCCEEEEECCCCCCCEEEEEEECCEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEE ALGLSVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPG EEEEEECEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCC GPEPRLLYAHKDLPLGLAFSPDGRYLASGGQDREVRLYDLDAGLLERVYVGHTGAVYGLD CCCCEEEEEECCCCEEEEECCCCCEEECCCCCCEEEEEECCCHHHHHEEECCCCEEEEEC FNPQTPALATGGGEGRVLLFRLP CCCCCCEEEECCCCCEEEEEECC >Mature Secondary Structure MRALGLLFLLLPALAQNLAPAFQLDCRFRGEARPAQVFWDGSPLGTCPLEVRAAPGRHLL CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCEEE RLRLEEPGGTYLAYEARVEVGEGGLGAFTAELLRYDPRGEALKGGKGLVYALAYGPKGVL EEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCEE ALGDAAGQVRLLPPGRPPLDLKGHASYVRDLAFSPDGRYLASASGDGTVRLYEAQGRFLR EEECCCCEEEECCCCCCCCCCCCCHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCEEH ALGKGPAFLKVGFDAQGRLFGLQLRGNLTLFDPATGKVLAARPLSPYLFSAAQSPGGRVL HHCCCCEEEEECCCCCCCEEEEEEECCEEEECCCCCCEEEECCCCHHHHHHCCCCCCEEE ALGLSVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPG EEEEEECEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCC GPEPRLLYAHKDLPLGLAFSPDGRYLASGGQDREVRLYDLDAGLLERVYVGHTGAVYGLD CCCCEEEEEECCCCEEEEECCCCCEEECCCCCCEEEEEECCCHHHHHEEECCCCEEEEEC FNPQTPALATGGGEGRVLLFRLP CCCCCCEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8631732 [H]