| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980656
Identifier: 55980656
GI number: 55980656
Start: 650304
End: 650720
Strand: Reverse
Name: 55980656
Synonym: TTHA0687
Alternate gene names: NA
Gene position: 650720-650304 (Counterclockwise)
Preceding gene: 55980657
Following gene: 55980655
Centisome position: 35.18
GC content: 65.95
Gene sequence:
>417_bases ATGCGCGACCGCATCCTGGCATTCCTCGTCCTCCTCCCCTCCGTCCTCGCCGTGGGGGTCTTCGTCTACGGCTTCATCGG GCAGAACCTCTGGGTCTCCCTCACCGACTGGGGCAAGGACCCGGCCCAGGCCCTGGCCCTAAGGCCCGAGCTCCGCTTCG TGGGCCTGGAGAACTACCGCGAGCTCTTCACCGGTTTTGTGGACGTCCGCTTCCGCCAAAGCGTCGTGAACCTCATCTTC TTCACCCTCTTCTTCATGGCCGGAAGCCTGGGCCTGGGCCTCCTCCTCGCCCTCGCGGTGGACAAGGCCCCCAGGGGGGA AGCTTCTTCCGCACGGTCTTCCTCTTCCCCATGGCCCTCTCCTTCGTGGTCACCGGGACCATCTGGCGCTGGCTTTTGCA GCCCCAAGGCGGGGTGA
Upstream 100 bases:
>100_bases GCCAACGCCGCCCAGGCCATCGCCGACCAGGTGGGCCTGGGCCGGCTGGGCCAGTAAGAGGCCGCGTGGGGTGGGCCTCG GCCCACCCCCTTTTTTTCCC
Downstream 100 bases:
>100_bases ACGTCCTCCCCACCCTCTTCGGCCTGCCCCCCCTCTCCTTCCCCTGGCTCGCCACCCGGGAACAGGTCCTGGTCTTTGAC TGGAACCGCTTGCCCTTCTA
Product: sugar ABC transporter permease
Products: NA
Alternate protein names: Sugar ABC Transporter Permease Protein; Glucose Transport System Permease; Glucose Transport System Permease Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRDRILAFLVLLPSVLAVGVFVYGFIGQNLWVSLTDWGKDPAQALALRPELRFVGLENYRELFTGFVDVRFRQSVVNLIF FTLFFMAGSLGLGLLLALAVDKAPRGEASSARSSSSPWPSPSWSPGPSGAGFCSPKAG
Sequences:
>Translated_138_residues MRDRILAFLVLLPSVLAVGVFVYGFIGQNLWVSLTDWGKDPAQALALRPELRFVGLENYRELFTGFVDVRFRQSVVNLIF FTLFFMAGSLGLGLLLALAVDKAPRGEASSARSSSSPWPSPSWSPGPSGAGFCSPKAG >Mature_138_residues MRDRILAFLVLLPSVLAVGVFVYGFIGQNLWVSLTDWGKDPAQALALRPELRFVGLENYRELFTGFVDVRFRQSVVNLIF FTLFFMAGSLGLGLLLALAVDKAPRGEASSARSSSSPWPSPSWSPGPSGAGFCSPKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14925; Mature: 14925
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRILAFLVLLPSVLAVGVFVYGFIGQNLWVSLTDWGKDPAQALALRPELRFVGLENYR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCEEECHHHHH ELFTGFVDVRFRQSVVNLIFFTLFFMAGSLGLGLLLALAVDKAPRGEASSARSSSSPWPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PSWSPGPSGAGFCSPKAG CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDRILAFLVLLPSVLAVGVFVYGFIGQNLWVSLTDWGKDPAQALALRPELRFVGLENYR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCEEECHHHHH ELFTGFVDVRFRQSVVNLIFFTLFFMAGSLGLGLLLALAVDKAPRGEASSARSSSSPWPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PSWSPGPSGAGFCSPKAG CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA