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The map label for this gene is ycjP [C]

Identifier: 55980654

GI number: 55980654

Start: 648806

End: 649612

Strand: Reverse

Name: ycjP [C]

Synonym: TTHA0685

Alternate gene names: 55980654

Gene position: 649612-648806 (Counterclockwise)

Preceding gene: 55980655

Following gene: 55980653

Centisome position: 35.12

GC content: 66.91

Gene sequence:

>807_bases
ATGGGCCGGGCCCTCCTCTACGGCTTCCTCCTCCTCATGGCGGGCTTCTTCCTCCTCCCCGTGTACCTGGTGGTCCTCAC
CGCCCTAAAGGAGCCCGCCCGGATCACCCTGGAGACGGTCTGGCAGTGGCCCCACCCCCCCTACTGGGAGAGCTTCCGCA
CCGCCTGGGAGGCCTTCCGGCCCAAGTTCCAGAACTCCGTGGTCCTCGCCGTCTCCGCCACCCTCCTCTCCGCCCTGGTG
GGGTCCCTGAACGGGTACGTCCTGGCCAAGTGGCCCTTCCGGGGGTCGGGCCTCCTCTTCGCCCTGATCCTCTTCGGGAT
GTTCATCCCCTACCAGAGCATCCTCATCCCCCTCTTCCAGTTCATGAAGTCCATCGGCCTCTACGGCAGCCTCTTCGGGC
TCGTCCTGGTCCACGTCATCTACGGCATCCCCATCGTCACCCTCATCTTCCGCAACTACTACAGCGAGATCCCCGACGAG
CTTGTGGAGGCGGCCCGCATTGACGGGGCGGGGTTCTTCGGCATCTTCCGCCACGTGATCCTGCCCCTCTCCGTCCCCGC
CTTCGTGGTGGTGGCCATCTGGCAGTTCACCCAGATCTGGAACGAGTTCCTCTTCGCCGTCACCCTCACCCGGCCCGAGA
GCCAGCCCATCACCGTGGCCCTGGCCCAGCTCGCCGGAGGGGAGGCGGTGAAGTGGAACCTGCCCATGGCCGGGGCCATC
CTGGCGGCCCTTCCCACCCTCCTCGTCTACATCCTCCTCGGCCGCTACTTCCTCCGGGGCCTCCTCGCGGGCTCGGTGAA
GGGGTAG

Upstream 100 bases:

>100_bases
TCGCCAAGGGGGCCGCCATCGGCATCCTCCTGCTCCTCCTCGTGGCCGTGGTGGTCGTCCCCTACCTGGCCACCCAGCTC
AGGAAGGAGGTGCGGCGGTG

Downstream 100 bases:

>100_bases
GGCCTTCACCCTTTTCACGCCCGCCCCCCCTAAAATGGCGGAACCATGAGCGGGGCCGAGCTCATCCGGGCGGCAGGACC
CGTTTTCTGGATCCTGTTCG

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGRALLYGFLLLMAGFFLLPVYLVVLTALKEPARITLETVWQWPHPPYWESFRTAWEAFRPKFQNSVVLAVSATLLSALV
GSLNGYVLAKWPFRGSGLLFALILFGMFIPYQSILIPLFQFMKSIGLYGSLFGLVLVHVIYGIPIVTLIFRNYYSEIPDE
LVEAARIDGAGFFGIFRHVILPLSVPAFVVVAIWQFTQIWNEFLFAVTLTRPESQPITVALAQLAGGEAVKWNLPMAGAI
LAALPTLLVYILLGRYFLRGLLAGSVKG

Sequences:

>Translated_268_residues
MGRALLYGFLLLMAGFFLLPVYLVVLTALKEPARITLETVWQWPHPPYWESFRTAWEAFRPKFQNSVVLAVSATLLSALV
GSLNGYVLAKWPFRGSGLLFALILFGMFIPYQSILIPLFQFMKSIGLYGSLFGLVLVHVIYGIPIVTLIFRNYYSEIPDE
LVEAARIDGAGFFGIFRHVILPLSVPAFVVVAIWQFTQIWNEFLFAVTLTRPESQPITVALAQLAGGEAVKWNLPMAGAI
LAALPTLLVYILLGRYFLRGLLAGSVKG
>Mature_267_residues
GRALLYGFLLLMAGFFLLPVYLVVLTALKEPARITLETVWQWPHPPYWESFRTAWEAFRPKFQNSVVLAVSATLLSALVG
SLNGYVLAKWPFRGSGLLFALILFGMFIPYQSILIPLFQFMKSIGLYGSLFGLVLVHVIYGIPIVTLIFRNYYSEIPDEL
VEAARIDGAGFFGIFRHVILPLSVPAFVVVAIWQFTQIWNEFLFAVTLTRPESQPITVALAQLAGGEAVKWNLPMAGAIL
AALPTLLVYILLGRYFLRGLLAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=27.3076923076923, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1789860, Length=204, Percent_Identity=28.921568627451, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=33.9622641509434, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1787368, Length=178, Percent_Identity=26.4044943820225, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29832; Mature: 29701

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRALLYGFLLLMAGFFLLPVYLVVLTALKEPARITLETVWQWPHPPYWESFRTAWEAFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PKFQNSVVLAVSATLLSALVGSLNGYVLAKWPFRGSGLLFALILFGMFIPYQSILIPLFQ
HHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMKSIGLYGSLFGLVLVHVIYGIPIVTLIFRNYYSEIPDELVEAARIDGAGFFGIFRHVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LPLSVPAFVVVAIWQFTQIWNEFLFAVTLTRPESQPITVALAQLAGGEAVKWNLPMAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH
LAALPTLLVYILLGRYFLRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRALLYGFLLLMAGFFLLPVYLVVLTALKEPARITLETVWQWPHPPYWESFRTAWEAFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PKFQNSVVLAVSATLLSALVGSLNGYVLAKWPFRGSGLLFALILFGMFIPYQSILIPLFQ
HHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMKSIGLYGSLFGLVLVHVIYGIPIVTLIFRNYYSEIPDELVEAARIDGAGFFGIFRHVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LPLSVPAFVVVAIWQFTQIWNEFLFAVTLTRPESQPITVALAQLAGGEAVKWNLPMAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHH
LAALPTLLVYILLGRYFLRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]