| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980614
Identifier: 55980614
GI number: 55980614
Start: 613510
End: 614523
Strand: Reverse
Name: 55980614
Synonym: TTHA0645
Alternate gene names: NA
Gene position: 614523-613510 (Counterclockwise)
Preceding gene: 55980616
Following gene: 55980613
Centisome position: 33.22
GC content: 57.59
Gene sequence:
>1014_bases ATGGGCCAGTACTTGGAGGCGCTAGTACCTCCTTTGTCCCAACACCTTGACCTTTCCCTTTATGTTCCCGAGCATTTTGA GGGAAACGTCCCCGTTAAGGTCGTCCGCTTCCCTACCGGGGCATCCCGAGCCCAAGCCCTTAGGCGGTTTTTAGACCCGA GGCCCGCCCGCACCCTTTGGCAAAAAATTCTCACAGAGAAGCCCGACTGCCTCTATCTTTTCAACGGCGAAGGGTACCCA TGGGCGCTCTGGCTAGCCAGGTGGGCTAAGAAAGAGGGTGTCCCGCTCTTCCTCACCCTTCATGACCCTGATCCCCATCC GGGGAACCCCTGGGAAGCCGCCAACGCCCTCCTGCGCCGCTGGGTTGTGCCTTTGGCCACAAGCGTACACGTACACTCTC AGGTGTTTGTGGATAAAGCCCGGAAGCTCGGAGCCCGACACGTCGTAGTGATCCCTCACGGGAGTTTTGCCGACCGCTTC CTTCGGCACGCCAAACCGGGTGTCCAACGCGAAGAAGACCTTGTCCTTTTCTTCGGTCGCCTCGAGGCCTACAAGGGAAT AGACATTCTTGTCAAGGCCATTTTAGCCTTGGAAGGGCGCAGAAGAGCCCTAATCGCGGGGCCGGGGCAGGTACCCCGTA TTCTAAGAAGGGCAATGAGAGAGCACCCTTCATGGTTTGAGGTTCATAACCGCTACGTACCCGATGAGGAAGCCGCCCTC TTTTTCCAAAGGGCATCGGTTCTCGTCCTTCCCTACCGGCAGGCTACACAGTCTTCCTTGCCCCTCATCGGGGCCGCTTT TGGGCTCGCTGTAGTGGCTTCGGCCGTAGGTGCCTTCGTGGAAGACGTGCCCCGCGTAGGGGGTATACTAGTACCCCCAA ATAATCCTCAGACCCTGGCACAGGTACTTGCAATTGCAAAACCTAAGGAAAGGAGCTACCACAACCCGGACCTAACGTTC CAGCTTTTGGCCAGGCAATTTGTGGCATGGCTTGAAGGGGGTCTCCGAAGGTGA
Upstream 100 bases:
>100_bases AAGGATAGGTAGAGGGCATGGTTGGTAAGCGCCTCGAGGCCATCTACCAGGAGGTTCTCAGGTGAAAGTGGCGCTTCTAG CTTTCTCCGTCCGAGGAGCT
Downstream 100 bases:
>100_bases CCTTAGGCGAGAAAAGCTCGGCTTATATCAAGGTTGCGCCAATATCGCTTGCTTTGCTTTGGGCAACCTTTGCCTTCCTC GTGAAAACAGTCATAGCCAC
Product: glycosyltransferase
Products: NA
Alternate protein names: Lipopolysaccharide Transferase Family Protein; Lipopolysaccharide Core Biosynthesis Mannosyltransferase; Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyltransferase Protein; Related Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGQYLEALVPPLSQHLDLSLYVPEHFEGNVPVKVVRFPTGASRAQALRRFLDPRPARTLWQKILTEKPDCLYLFNGEGYP WALWLARWAKKEGVPLFLTLHDPDPHPGNPWEAANALLRRWVVPLATSVHVHSQVFVDKARKLGARHVVVIPHGSFADRF LRHAKPGVQREEDLVLFFGRLEAYKGIDILVKAILALEGRRRALIAGPGQVPRILRRAMREHPSWFEVHNRYVPDEEAAL FFQRASVLVLPYRQATQSSLPLIGAAFGLAVVASAVGAFVEDVPRVGGILVPPNNPQTLAQVLAIAKPKERSYHNPDLTF QLLARQFVAWLEGGLRR
Sequences:
>Translated_337_residues MGQYLEALVPPLSQHLDLSLYVPEHFEGNVPVKVVRFPTGASRAQALRRFLDPRPARTLWQKILTEKPDCLYLFNGEGYP WALWLARWAKKEGVPLFLTLHDPDPHPGNPWEAANALLRRWVVPLATSVHVHSQVFVDKARKLGARHVVVIPHGSFADRF LRHAKPGVQREEDLVLFFGRLEAYKGIDILVKAILALEGRRRALIAGPGQVPRILRRAMREHPSWFEVHNRYVPDEEAAL FFQRASVLVLPYRQATQSSLPLIGAAFGLAVVASAVGAFVEDVPRVGGILVPPNNPQTLAQVLAIAKPKERSYHNPDLTF QLLARQFVAWLEGGLRR >Mature_336_residues GQYLEALVPPLSQHLDLSLYVPEHFEGNVPVKVVRFPTGASRAQALRRFLDPRPARTLWQKILTEKPDCLYLFNGEGYPW ALWLARWAKKEGVPLFLTLHDPDPHPGNPWEAANALLRRWVVPLATSVHVHSQVFVDKARKLGARHVVVIPHGSFADRFL RHAKPGVQREEDLVLFFGRLEAYKGIDILVKAILALEGRRRALIAGPGQVPRILRRAMREHPSWFEVHNRYVPDEEAALF FQRASVLVLPYRQATQSSLPLIGAAFGLAVVASAVGAFVEDVPRVGGILVPPNNPQTLAQVLAIAKPKERSYHNPDLTFQ LLARQFVAWLEGGLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37900; Mature: 37768
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQYLEALVPPLSQHLDLSLYVPEHFEGNVPVKVVRFPTGASRAQALRRFLDPRPARTLW CCHHHHHHCCCHHHHCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHH QKILTEKPDCLYLFNGEGYPWALWLARWAKKEGVPLFLTLHDPDPHPGNPWEAANALLRR HHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHH WVVPLATSVHVHSQVFVDKARKLGARHVVVIPHGSFADRFLRHAKPGVQREEDLVLFFGR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEH LEAYKGIDILVKAILALEGRRRALIAGPGQVPRILRRAMREHPSWFEVHNRYVPDEEAAL HHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH FFQRASVLVLPYRQATQSSLPLIGAAFGLAVVASAVGAFVEDVPRVGGILVPPNNPQTLA HHHHCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH QVLAIAKPKERSYHNPDLTFQLLARQFVAWLEGGLRR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GQYLEALVPPLSQHLDLSLYVPEHFEGNVPVKVVRFPTGASRAQALRRFLDPRPARTLW CHHHHHHCCCHHHHCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHH QKILTEKPDCLYLFNGEGYPWALWLARWAKKEGVPLFLTLHDPDPHPGNPWEAANALLRR HHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHH WVVPLATSVHVHSQVFVDKARKLGARHVVVIPHGSFADRFLRHAKPGVQREEDLVLFFGR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEH LEAYKGIDILVKAILALEGRRRALIAGPGQVPRILRRAMREHPSWFEVHNRYVPDEEAAL HHHHCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH FFQRASVLVLPYRQATQSSLPLIGAAFGLAVVASAVGAFVEDVPRVGGILVPPNNPQTLA HHHHCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH QVLAIAKPKERSYHNPDLTFQLLARQFVAWLEGGLRR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA