Click here to switch to the map view.

The map label for this gene is 55980613

Identifier: 55980613

GI number: 55980613

Start: 612308

End: 613513

Strand: Reverse

Name: 55980613

Synonym: TTHA0644

Alternate gene names: NA

Gene position: 613513-612308 (Counterclockwise)

Preceding gene: 55980614

Following gene: 55980612

Centisome position: 33.17

GC content: 50.0

Gene sequence:

>1206_bases
GTGACCTTAGGCGAGAAAAGCTCGGCTTATATCAAGGTTGCGCCAATATCGCTTGCTTTGCTTTGGGCAACCTTTGCCTT
CCTCGTGAAAACAGTCATAGCCACAGGCCTGCACCTGTACTCGTTAGTAAGCGGATTTGAGGGATTTTATCCCCTAGCCT
CGGGGGCAGACGATCGCTTTTATCATTGGGCTGCCGTTTCCCTAGTCCAATCAGGGACCCCAGAAAATCTTCCGAACGCC
TATCCTTATCTCCTCGCTTGGATTTACCAATTCGTGGGACCGTCCTTGATGTGGGGGAAAATCGTCAATGTCCTTTTAAG
CTCAATTGCAGTCTACTATGGGGTGCTCCTGGCCTACGAGCTTTCCAGGGCAAAGGCCAGGTTGTGGCGGCTTTCCTCCG
CTCCAAACCTGGCGGGCCTTCTTCTCGTCGCCTATCCTTCGGGTTTGTTTTATGGTGGCCAGCTCCTCAAGGATCCGGCA
GTCTTGGCTTTGGGGATGGCCTCTCTTTACTGGTCTGCAAAACTACTTTGGAAACCCCGCTTAAGGGAAACTATTTTCCT
CGTCATAGGGCTGGTAGGGCTTTACCAGTTTAGAGGATATGCATCTGTAGCCTTGCTGGGAGCACTTTCGGTATATGCCC
TTACCCAAATCTGGCGGAGGCCACTCTACGTTGCTCTCGTAGCTTTAATCGCCGTTTTAGTTCCAATTGCTCTTGGATGG
GGGCCTCTGGGTTTGAAGTACCTAGCTCCCCTTCTCAATCCCGAGAAGATCTCACACATTAGAGAAGAAGTTTATTCTAT
TGGAGGGAGTGCCGTAGACATTTCTTTGGATTTCTCCAATCCGATAGCTTTCCTGATAAGCTATGCGTACAGCTTCGCCA
CAGTTCTATTAGGGCCCCTGCCTTGGCAAGTCAAGAGTCCTATCGTGGCTATCGCCTTAGTTGAGGCTGTTCCTATGTGG
TTTCTTTTAGCAACGGTTTGGCTACGCAACTCTTTTCGGTGCGCTGATCGAAGGGCAACTTTTTTGGTAATCTTTGTCTT
AATTTACATCGGTGGTCTAGCTCTGATCAGTGACAATATTGGGGCCAACACTCGTTTGCGACTCCTACCGTGGTCCACTC
TGCTTGTTTGGATAGCTCTCCAGCTAGAAATCCAGCTAGAAAGAAGGAGAAAGCATGCGCCTCCTCTACCTCATCACTCG
CGCTGA

Upstream 100 bases:

>100_bases
CAATTGCAAAACCTAAGGAAAGGAGCTACCACAACCCGGACCTAACGTTCCAGCTTTTGGCCAGGCAATTTGTGGCATGG
CTTGAAGGGGGTCTCCGAAG

Downstream 100 bases:

>100_bases
ACCCGGGGGAGCCCAGGTCCACCTCCTGGAACTCCTCCGAGGCTTCCGGGACCGGGCGGAGCTCCACCTGGGGGTGGGGG
AGGACCAAGACGGCTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTLGEKSSAYIKVAPISLALLWATFAFLVKTVIATGLHLYSLVSGFEGFYPLASGADDRFYHWAAVSLVQSGTPENLPNA
YPYLLAWIYQFVGPSLMWGKIVNVLLSSIAVYYGVLLAYELSRAKARLWRLSSAPNLAGLLLVAYPSGLFYGGQLLKDPA
VLALGMASLYWSAKLLWKPRLRETIFLVIGLVGLYQFRGYASVALLGALSVYALTQIWRRPLYVALVALIAVLVPIALGW
GPLGLKYLAPLLNPEKISHIREEVYSIGGSAVDISLDFSNPIAFLISYAYSFATVLLGPLPWQVKSPIVAIALVEAVPMW
FLLATVWLRNSFRCADRRATFLVIFVLIYIGGLALISDNIGANTRLRLLPWSTLLVWIALQLEIQLERRRKHAPPLPHHS
R

Sequences:

>Translated_401_residues
MTLGEKSSAYIKVAPISLALLWATFAFLVKTVIATGLHLYSLVSGFEGFYPLASGADDRFYHWAAVSLVQSGTPENLPNA
YPYLLAWIYQFVGPSLMWGKIVNVLLSSIAVYYGVLLAYELSRAKARLWRLSSAPNLAGLLLVAYPSGLFYGGQLLKDPA
VLALGMASLYWSAKLLWKPRLRETIFLVIGLVGLYQFRGYASVALLGALSVYALTQIWRRPLYVALVALIAVLVPIALGW
GPLGLKYLAPLLNPEKISHIREEVYSIGGSAVDISLDFSNPIAFLISYAYSFATVLLGPLPWQVKSPIVAIALVEAVPMW
FLLATVWLRNSFRCADRRATFLVIFVLIYIGGLALISDNIGANTRLRLLPWSTLLVWIALQLEIQLERRRKHAPPLPHHS
R
>Mature_400_residues
TLGEKSSAYIKVAPISLALLWATFAFLVKTVIATGLHLYSLVSGFEGFYPLASGADDRFYHWAAVSLVQSGTPENLPNAY
PYLLAWIYQFVGPSLMWGKIVNVLLSSIAVYYGVLLAYELSRAKARLWRLSSAPNLAGLLLVAYPSGLFYGGQLLKDPAV
LALGMASLYWSAKLLWKPRLRETIFLVIGLVGLYQFRGYASVALLGALSVYALTQIWRRPLYVALVALIAVLVPIALGWG
PLGLKYLAPLLNPEKISHIREEVYSIGGSAVDISLDFSNPIAFLISYAYSFATVLLGPLPWQVKSPIVAIALVEAVPMWF
LLATVWLRNSFRCADRRATFLVIFVLIYIGGLALISDNIGANTRLRLLPWSTLLVWIALQLEIQLERRRKHAPPLPHHSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44389; Mature: 44258

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGEKSSAYIKVAPISLALLWATFAFLVKTVIATGLHLYSLVSGFEGFYPLASGADDRF
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YHWAAVSLVQSGTPENLPNAYPYLLAWIYQFVGPSLMWGKIVNVLLSSIAVYYGVLLAYE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAKARLWRLSSAPNLAGLLLVAYPSGLFYGGQLLKDPAVLALGMASLYWSAKLLWKPR
HHHHHHHHHHCCCCCCHHHEEEEEECCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCHH
LRETIFLVIGLVGLYQFRGYASVALLGALSVYALTQIWRRPLYVALVALIAVLVPIALGW
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPLGLKYLAPLLNPEKISHIREEVYSIGGSAVDISLDFSNPIAFLISYAYSFATVLLGPL
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
PWQVKSPIVAIALVEAVPMWFLLATVWLRNSFRCADRRATFLVIFVLIYIGGLALISDNI
CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCC
GANTRLRLLPWSTLLVWIALQLEIQLERRRKHAPPLPHHSR
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLGEKSSAYIKVAPISLALLWATFAFLVKTVIATGLHLYSLVSGFEGFYPLASGADDRF
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YHWAAVSLVQSGTPENLPNAYPYLLAWIYQFVGPSLMWGKIVNVLLSSIAVYYGVLLAYE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAKARLWRLSSAPNLAGLLLVAYPSGLFYGGQLLKDPAVLALGMASLYWSAKLLWKPR
HHHHHHHHHHCCCCCCHHHEEEEEECCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCHH
LRETIFLVIGLVGLYQFRGYASVALLGALSVYALTQIWRRPLYVALVALIAVLVPIALGW
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPLGLKYLAPLLNPEKISHIREEVYSIGGSAVDISLDFSNPIAFLISYAYSFATVLLGPL
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
PWQVKSPIVAIALVEAVPMWFLLATVWLRNSFRCADRRATFLVIFVLIYIGGLALISDNI
CCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCC
GANTRLRLLPWSTLLVWIALQLEIQLERRRKHAPPLPHHSR
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA