| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is ppc
Identifier: 55980595
GI number: 55980595
Start: 596552
End: 599128
Strand: Direct
Name: ppc
Synonym: TTHA0626
Alternate gene names: 55980595
Gene position: 596552-599128 (Clockwise)
Preceding gene: 55980594
Following gene: 55980597
Centisome position: 32.25
GC content: 72.6
Gene sequence:
>2577_bases GTGAGCCAGGACCCCTTCGCCCTCCTTAAGGCCGAGGTGGACCTCCTCGGCCGCCTCCTCGGGGAGGCCATCCGGACCCT CTCCGGGGAGCGCTTCTTCGCCCTGGTGGAGGAGGTGCGGGCCCTCGCCAAGGCCCGCCGCCAGGGGGACGAGGCGGCGG GAGAGGCGCTTCTGGCCCGGGTGGAGGGGCTTTCCACCGAGGAGGCCGAGGCCTTGGTGCGGGCCTTCACCCACTACTTC CACCTGGTGAACCTGGCGGAGGAGCGGCACCGGGTGCGGGTGAACCGCCTAAGGGCCCAGGCCGAGACCCTGGAAAGCCC CAGGCCCGAGGGCTTCCTGGCCCTGGCCAAGGCGCTTAAGGAGCGGGGGCTTTCCCTGGAGGAGGCCGAGGCCCACCTGA ACCGCCTGGAGCTCCTCCTCACCTTCACCGCCCACCCCACGGAGACCCGGCGCCGCACCCTGCGCCACCACCTCGAGGCC CTGCAGAGGGAGCTGGAGGCGGGGGATAGGGAAAGGCTCGCCGCCCGGGTGGCCCTCCTCTACGGCACGGAGGAGGTGCG CAAGGCCCGCCCCACGGTGGAGGACGAGATCAAGGGGGGGCTTTACTACCTGCCCACCACCCTGTGGGAGGCCGTGCCCC GGGTGGTGGCGGGCCTCGAGGCCGCCCTGGAGAGGGTCTACGGGCGAAGGCCCCGCCTGAAAAGCCCCGTGCGCTTTAGG AGCTGGATCGGCGGCGACCGGGACGGCAACCCCTTCGTCACCCCCGAGGTCACCGCCTTCGCCGGGCGCTACGCCCGGGA GGTGGCCCGGAGGCGGTTTCTGGAGGCCCTCGAGGACCTCGTGCGCGACCTCTCCCTGGCCGAGGCCCGCGTTCCCGTCC CCCGGGAGGTGCGGGAGAGGGGAGAGGGGGTGGAGCGCTTCATGGGGGAGCCCTACCGCCGCTACTTCGCCGCCCTGTAC CGGGCCTTGGAGCGGGAGGAGGCCACCACGGAAGGGCTTCTCGCCGCCCTGAAGGCGGCGGAGCGGGGGCTTAGGGAGGT GGGGCTTGGCCGGGTGGCGGAGGCCTTCTTGGACCCCTTGGAGGCCCGCCTTTCCGCCTTCGGCCTGGAGCTCGCCCCCC TGGACCTCAGGGAGGAGTCGGGGAGGCTCCTCGAGGCCGCGGCCGAGCTCCTCCGGGTGGGCGGGGTCCACCCCGACTTC CTCGCCCTTCCCCAGGAGGAGCGGGAGCGCCTCCTCACCGAGGAGCTCAAGACCGCCCGCCCCCTCCTCCCCGTGGGGGA GGCCCCGGAGGGGGAGGCCCTAAGGGTGGCCCTGGGGGCCCTGAAGGCCTGGCGGGACAAGGGGGCCCACGTGGTCTCCA TGACCCATCACCCGGAGGACCTCCTCGCCGTCTTCCTCCTCGCCCGGGAGGTGGGGCTCTACCGCCCCGGCCGGCCCCTG CCCTTTGACGTGGTCCCCCTCTTTGAGACCCTGGAGGACCTGAGGCGGGCCCCCGGGGTGCTCCGCCGCCTTTTGGAGAA CCCCGTCTTCCTGGCCCACGCCCGGGGGCGGGGCGGGGTGGAGGTGATGATCGGCTACTCCGACTCCAACAAGGACGCGG GCTTCCTCATGGCCAACCTCGCCCTCTACGAGGCCCAGGAGGCCTTAAGCCGGGTGGGGGAGGAGGTGGGGCTTCCCGTC TACTTCTTCCACGGCCGGGGGACCTCCACGGCGAGGGGTGGGGGCCCCGCGGGCCGGGCCATCGCGAGCCTCCCGCCCCG GAGCGTGGGGCGGAGGATCCGCCTCACGGAGCAGGGGGAGGCCCTGGCGGACCGGTACAGCCACCCCGACCTCGCCGTGC GCCACCTGGAGCAGATGCTGTACCACTTCGCCCTGGCGGCCCTGGGCCCCGGCCAGGAGCCCGAGGCGCGCTGGCGGGAG GCCCTGGCCCAGGCGGCGGAGGAGAGCACCCGCCGCTACCGCGCCCTCCTCCAGGAGGAGGGGTTCTTTGACTTCTTTGA GGCCTTCACCCCCATCCGGGAGATCGGGGAGCTTCCCATCGCCAGCCGCCCCGTGTACCGCCGGGGGCGGGTGCGGGACA TCCGGGACCTCCGGGCCATCCCTTGGGTCATGGCCTGGACCCAGGTCCGGGTTCTCCTGCCCGGCTGGTACGGCCTCTCC GCTCTGGAAGAGCTTCCTTTGGACCTTCTCCGGGAGATGTACCGGGGCTGGCCCTTCTTCGCCTCCACCCTGGAGGCCGC GGCCATGGCCCTCGCCAAGGCGGATATGGGGGTGGCCCGCCTCTATCTGCGCCTGGTCCCCGAGCCCCTGCGGTTCTTCT ACCGCCGGCTCGCCGAGGAACACGCCCGCACCGTGGCCCTTTTGGAGGCCGTCTTCCAGGCCCCCCTCCTCCACAACCAG AGGACCCTGGAGCGGCAGATCCGGCTCCGTAACCCCTACGTGGACCCCATCAACATCGTCCAGGTGGAGCTTCTCCGCCG CTATCGGGCTCCCGGGGGCAAGGAGGACGAGGCCCTGAGGCGGGCCCTTCTCCTCTCCATCCTGGGCGTGGCGGCGGGCC TCAGGAACGCGGGTTGA
Upstream 100 bases:
>100_bases CCTTCCGCGCCGCCCAAGGCAAGGCCCGCTTCCACGCCACGGAGCTCGTCTTTGAAGGGGGGAGGCCCGTGGCCATAAGC CCCTACGTCTGGGAGGAGCC
Downstream 100 bases:
>100_bases AAACGTCTGCTGGGTTGCCGGCCTAAGGCTTGGGGGCTGCTCCAAGCCGAAGCTCGGTTTGGGGTACCTGCCGTTTTTCT TCTGGGGCCGGCTCAGGTCT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MSQDPFALLKAEVDLLGRLLGEAIRTLSGERFFALVEEVRALAKARRQGDEAAGEALLARVEGLSTEEAEALVRAFTHYF HLVNLAEERHRVRVNRLRAQAETLESPRPEGFLALAKALKERGLSLEEAEAHLNRLELLLTFTAHPTETRRRTLRHHLEA LQRELEAGDRERLAARVALLYGTEEVRKARPTVEDEIKGGLYYLPTTLWEAVPRVVAGLEAALERVYGRRPRLKSPVRFR SWIGGDRDGNPFVTPEVTAFAGRYAREVARRRFLEALEDLVRDLSLAEARVPVPREVRERGEGVERFMGEPYRRYFAALY RALEREEATTEGLLAALKAAERGLREVGLGRVAEAFLDPLEARLSAFGLELAPLDLREESGRLLEAAAELLRVGGVHPDF LALPQEERERLLTEELKTARPLLPVGEAPEGEALRVALGALKAWRDKGAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPL PFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPV YFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRYSHPDLAVRHLEQMLYHFALAALGPGQEPEARWRE ALAQAAEESTRRYRALLQEEGFFDFFEAFTPIREIGELPIASRPVYRRGRVRDIRDLRAIPWVMAWTQVRVLLPGWYGLS ALEELPLDLLREMYRGWPFFASTLEAAAMALAKADMGVARLYLRLVPEPLRFFYRRLAEEHARTVALLEAVFQAPLLHNQ RTLERQIRLRNPYVDPINIVQVELLRRYRAPGGKEDEALRRALLLSILGVAAGLRNAG
Sequences:
>Translated_858_residues MSQDPFALLKAEVDLLGRLLGEAIRTLSGERFFALVEEVRALAKARRQGDEAAGEALLARVEGLSTEEAEALVRAFTHYF HLVNLAEERHRVRVNRLRAQAETLESPRPEGFLALAKALKERGLSLEEAEAHLNRLELLLTFTAHPTETRRRTLRHHLEA LQRELEAGDRERLAARVALLYGTEEVRKARPTVEDEIKGGLYYLPTTLWEAVPRVVAGLEAALERVYGRRPRLKSPVRFR SWIGGDRDGNPFVTPEVTAFAGRYAREVARRRFLEALEDLVRDLSLAEARVPVPREVRERGEGVERFMGEPYRRYFAALY RALEREEATTEGLLAALKAAERGLREVGLGRVAEAFLDPLEARLSAFGLELAPLDLREESGRLLEAAAELLRVGGVHPDF LALPQEERERLLTEELKTARPLLPVGEAPEGEALRVALGALKAWRDKGAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPL PFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPV YFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRYSHPDLAVRHLEQMLYHFALAALGPGQEPEARWRE ALAQAAEESTRRYRALLQEEGFFDFFEAFTPIREIGELPIASRPVYRRGRVRDIRDLRAIPWVMAWTQVRVLLPGWYGLS ALEELPLDLLREMYRGWPFFASTLEAAAMALAKADMGVARLYLRLVPEPLRFFYRRLAEEHARTVALLEAVFQAPLLHNQ RTLERQIRLRNPYVDPINIVQVELLRRYRAPGGKEDEALRRALLLSILGVAAGLRNAG >Mature_857_residues SQDPFALLKAEVDLLGRLLGEAIRTLSGERFFALVEEVRALAKARRQGDEAAGEALLARVEGLSTEEAEALVRAFTHYFH LVNLAEERHRVRVNRLRAQAETLESPRPEGFLALAKALKERGLSLEEAEAHLNRLELLLTFTAHPTETRRRTLRHHLEAL QRELEAGDRERLAARVALLYGTEEVRKARPTVEDEIKGGLYYLPTTLWEAVPRVVAGLEAALERVYGRRPRLKSPVRFRS WIGGDRDGNPFVTPEVTAFAGRYAREVARRRFLEALEDLVRDLSLAEARVPVPREVRERGEGVERFMGEPYRRYFAALYR ALEREEATTEGLLAALKAAERGLREVGLGRVAEAFLDPLEARLSAFGLELAPLDLREESGRLLEAAAELLRVGGVHPDFL ALPQEERERLLTEELKTARPLLPVGEAPEGEALRVALGALKAWRDKGAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPLP FDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPVY FFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRYSHPDLAVRHLEQMLYHFALAALGPGQEPEARWREA LAQAAEESTRRYRALLQEEGFFDFFEAFTPIREIGELPIASRPVYRRGRVRDIRDLRAIPWVMAWTQVRVLLPGWYGLSA LEELPLDLLREMYRGWPFFASTLEAAAMALAKADMGVARLYLRLVPEPLRFFYRRLAEEHARTVALLEAVFQAPLLHNQR TLERQIRLRNPYVDPINIVQVELLRRYRAPGGKEDEALRRALLLSILGVAAGLRNAG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=907, Percent_Identity=36.2734288864388, Blast_Score=438, Evalue=1e-124,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_THET2 (Q72L05)
Other databases:
- EMBL: AE017221 - RefSeq: YP_004235.1 - ProteinModelPortal: Q72L05 - SMR: Q72L05 - STRING: Q72L05 - GeneID: 2774951 - GenomeReviews: AE017221_GR - eggNOG: COG2352 - HOGENOM: HBG351035 - OMA: AIPWVFG - PhylomeDB: Q72L05 - ProtClustDB: CLSK2761883 - BioCyc: TTHE262724:TT_C0260-MONOMER - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 96535; Mature: 96404
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 145-145 ACT_SITE 531-531
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDPFALLKAEVDLLGRLLGEAIRTLSGERFFALVEEVRALAKARRQGDEAAGEALLAR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VEGLSTEEAEALVRAFTHYFHLVNLAEERHRVRVNRLRAQAETLESPRPEGFLALAKALK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ERGLSLEEAEAHLNRLELLLTFTAHPTETRRRTLRHHLEALQRELEAGDRERLAARVALL HCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YGTEEVRKARPTVEDEIKGGLYYLPTTLWEAVPRVVAGLEAALERVYGRRPRLKSPVRFR HCCHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SWIGGDRDGNPFVTPEVTAFAGRYAREVARRRFLEALEDLVRDLSLAEARVPVPREVRER HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GEGVERFMGEPYRRYFAALYRALEREEATTEGLLAALKAAERGLREVGLGRVAEAFLDPL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARLSAFGLELAPLDLREESGRLLEAAAELLRVGGVHPDFLALPQEERERLLTEELKTAR HHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHCC PLLPVGEAPEGEALRVALGALKAWRDKGAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC PFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANL CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHH ALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGE HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCHHHCCEEEECCCCH ALADRYSHPDLAVRHLEQMLYHFALAALGPGQEPEARWREALAQAAEESTRRYRALLQEE HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GFFDFFEAFTPIREIGELPIASRPVYRRGRVRDIRDLRAIPWVMAWTQVRVLLPGWYGLS CHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALEELPLDLLREMYRGWPFFASTLEAAAMALAKADMGVARLYLRLVPEPLRFFYRRLAEE HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HARTVALLEAVFQAPLLHNQRTLERQIRLRNPYVDPINIVQVELLRRYRAPGGKEDEALR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH RALLLSILGVAAGLRNAG HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQDPFALLKAEVDLLGRLLGEAIRTLSGERFFALVEEVRALAKARRQGDEAAGEALLAR CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VEGLSTEEAEALVRAFTHYFHLVNLAEERHRVRVNRLRAQAETLESPRPEGFLALAKALK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ERGLSLEEAEAHLNRLELLLTFTAHPTETRRRTLRHHLEALQRELEAGDRERLAARVALL HCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YGTEEVRKARPTVEDEIKGGLYYLPTTLWEAVPRVVAGLEAALERVYGRRPRLKSPVRFR HCCHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SWIGGDRDGNPFVTPEVTAFAGRYAREVARRRFLEALEDLVRDLSLAEARVPVPREVRER HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GEGVERFMGEPYRRYFAALYRALEREEATTEGLLAALKAAERGLREVGLGRVAEAFLDPL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARLSAFGLELAPLDLREESGRLLEAAAELLRVGGVHPDFLALPQEERERLLTEELKTAR HHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHCC PLLPVGEAPEGEALRVALGALKAWRDKGAHVVSMTHHPEDLLAVFLLAREVGLYRPGRPL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC PFDVVPLFETLEDLRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFLMANL CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHH ALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGE HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCHHHCCEEEECCCCH ALADRYSHPDLAVRHLEQMLYHFALAALGPGQEPEARWREALAQAAEESTRRYRALLQEE HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GFFDFFEAFTPIREIGELPIASRPVYRRGRVRDIRDLRAIPWVMAWTQVRVLLPGWYGLS CHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALEELPLDLLREMYRGWPFFASTLEAAAMALAKADMGVARLYLRLVPEPLRFFYRRLAEE HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HARTVALLEAVFQAPLLHNQRTLERQIRLRNPYVDPINIVQVELLRRYRAPGGKEDEALR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH RALLLSILGVAAGLRNAG HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA