Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55980572

Identifier: 55980572

GI number: 55980572

Start: 570412

End: 571260

Strand: Reverse

Name: 55980572

Synonym: TTHA0603

Alternate gene names: NA

Gene position: 571260-570412 (Counterclockwise)

Preceding gene: 55980573

Following gene: 55980570

Centisome position: 30.88

GC content: 73.5

Gene sequence:

>849_bases
GTGCCCTTCCGCACCCTGCTCGCCGTCCAGGCCGAGGCCAGGCCGGAGCATTACCGCACGGCGGAGGCCTTCAGGGAGCG
GGTCTTCGCCCTCCTCGAGCCCCTAAGCGGCACCCCCGCCCCGAGGCTCGCCGCCTTCCCCGAGCTCTTCGGCCTCCCCC
TCCTCCTGCACCTGGACGGCGGGCTCGCCCCCAAGGCCCTCCTCTTGGACCCCCTCCTCCCCTGGCGGCGGGCCCGGCGG
GCCTACGGCGTCTTCCTCGAGGTCATGGCCGAGGCCGCACAGGCCTTCGGCGCCTACCTCCTCGCAGGCTCCCTCCTCTC
CCCCCCCTACGAGGAGGAGCTCGCCCGGGGCCGGTTCAGCCGCACCCCCTTCTTCCAGAACCTCGCCCTCTTCTTCAACC
CCAAGGGCCGCCTCCTCGCCCAGGTGCCCAAGATGGAGCTCACCCCCCCGGAAAGGTGGCTCCGGCGGGGCCGCTTCGGC
CCCCACCTGGTGGAGACCGAGGCGGGGAAGGTGGGGATCCTCATCTGCCTGGACGGCTTTTACGAGCGGCACCTCGCCCG
ACTGGACGCCCTGGGGGCGGAAATCCTCCTCCAGCCCTCCGCCAACCCCGCCCCCTGGGAAAGGCCCTGGCCCCCCGACC
CCGCCCGCAAGGAAGGGGAGGTGTGGGTGGCCTCGGCCCAAGCGCGCCTCCTCGGCCGGGAGCACCTCCGCCTCCTCCTC
AACCCCATGCTGAACGGGGAGGTGGCGGGCCTTGGCTTCCAGGGGCGAAGCGGGATCTACGCCCCCGGGGAGGCCCTCCT
CCTGGCCCAGGCCCCCACCGGGGACGAGGCCCTACTCCTCCGCCTCTAG

Upstream 100 bases:

>100_bases
AAGAACTACTACGGAGGCGCCTGATGTTCCTGGAGAAGTTCTCGGACTACGTCACCGGGGCCGTCCTCCCCGTGGACGGC
GGGGCCACGGCCCTCTAGCC

Downstream 100 bases:

>100_bases
GCGCTCGGGGTAGAGGCGCACGGGCACGGCCCGGACCAGGGCCTCCTCGAGCCGCTCCCAGGCCCGGTCCGCCACCTCCT
TCTCCAGAAGCGGGGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARR
AYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFG
PHLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL
NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL

Sequences:

>Translated_282_residues
MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARR
AYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFG
PHLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL
NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL
>Mature_281_residues
PFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARRA
YGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGP
HLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLLN
PMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31241; Mature: 31110

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDG
CCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCEEEEECC
GLAPKALLLDPLLPWRRARRAYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFS
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
RTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGPHLVETEAGKVGILICLDGF
CCCHHHCEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECHH
YERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL
HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
PFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDG
CCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCEEEEECC
GLAPKALLLDPLLPWRRARRAYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFS
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
RTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGPHLVETEAGKVGILICLDGF
CCCHHHCEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECHH
YERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL
HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA