| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980545
Identifier: 55980545
GI number: 55980545
Start: 543673
End: 544662
Strand: Reverse
Name: 55980545
Synonym: TTHA0576
Alternate gene names: NA
Gene position: 544662-543673 (Counterclockwise)
Preceding gene: 55980546
Following gene: 55980540
Centisome position: 29.45
GC content: 72.32
Gene sequence:
>990_bases ATGGTGGTCGGCGTAGCGGGGTACTACGGGTTCAGGAACGCCGGGGACGAGGCGATCCTCGAGGCCATCGCCCGGGAGCT CAAGGCCCGCGGCCACGAGGTGGTGGCCCTCTCCGGCGACCCCAAAAGGACCCGCGAGGACCACGGCCTCAGGGCCTACC ACCGCCTGAACCCCCTGGCCCTCCTCCGGGCGGACCTCTGGCTCCTCGGAGGAGGGGGGCTTCTGCAGGACGCCACCAGC GCCTTAAGCCTCACCTACTACCTCTCCGTGCTCCGCCTCGCCCGCCTCTTCCGCAAGCGGGTCGTGGTCTTCAACCAGTC CCTGGGCCCCCTCTCCCCCTGGGGGGAGAGGCGGGTGCGAAAGGCCCTCCAGGGCGTGCCGGTGATCCTCAGGGACCAGG ACTCCCTGGAGTACGCCCGGCGCCTGGGGATCCCCGCCGCCCTCGGGGCCGACCCCGCCCTCCTCCTCCCGCCGCCCCCC GTGCCGCGGGAGGAGGACCTCGTCCTCGTCATCCCCCGGGCGGGGGTGCGGGAGGAGGCCCTCACGACCCTCTACGTGGC CGCCAACCACCTGGTCCACGAGGGGAAGCAGGTCCTCGTCCTCCTCCTCCAGCCCGGCTACGACGACGAGGTGGCCGAGG TCTTCCGCCTCCACCGCATAGAGCGCACCTCCGACCCCCGCCGCCTCCTCTACCTCGCGGCCCAGGCGGGGTACGTGATC TCCATGCGCCTCCACGGCCTGATCCTGGCCGCGGCCGCGGGCACCCCCTTCGCCGCCCTCTCCTACGACCCCAAGGTGGC CGCCTTCGCCAAGGAGACGGGGGCCTACTACCAGGAGCTCCCCGGGGAGCCCATCAAGCTCTACAAGGCCGCCCTTTACG GCCGCTTCCCCGACTGGGAGAAGGTGGCCCGGCTGAAGGAGCGGGCGCGGCAGAGCTTTGACCTGGCGCTGGGGGAGGGC GTCCCCATCAAAGGCTCCGGGCGCGGCTGA
Upstream 100 bases:
>100_bases ACACCCCCCTCCCCATCTCCTTCTTCCGGGTGCTGAACGGCGCCCTCCTCGGCCTTTCCCTCGGGCTTGTCGGGGTTATC CTGGTAAGGAGGCTTAGGGC
Downstream 100 bases:
>100_bases GGCGGCCCGCAAGCCCCTCGGCGAAGGCCCTGAGGTCCTCCAGGGCCTCCTCCACGCTTTGGCGGAGCAGGAACTCCCCG GGGGAGAGGCGCTTGAGGAG
Product: pyruvyl-transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Csab
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG VPIKGSGRG
Sequences:
>Translated_329_residues MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG VPIKGSGRG >Mature_329_residues MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG VPIKGSGRG
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36191; Mature: 36191
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLA CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCHHH LLRADLWLLGGGGLLQDATSALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVR HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH KALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPPVPREEDLVLVIPRAGVREEA HHHCCCCEEEECCHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHH LTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI HHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEE SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWE EEEHHEEEEEECCCCCEEEECCCCCHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCHH KVARLKERARQSFDLALGEGVPIKGSGRG HHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLA CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCHHH LLRADLWLLGGGGLLQDATSALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVR HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH KALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPPVPREEDLVLVIPRAGVREEA HHHCCCCEEEECCHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHH LTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI HHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEE SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWE EEEHHEEEEEECCCCCEEEECCCCCHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCHH KVARLKERARQSFDLALGEGVPIKGSGRG HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA