Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55980545

Identifier: 55980545

GI number: 55980545

Start: 543673

End: 544662

Strand: Reverse

Name: 55980545

Synonym: TTHA0576

Alternate gene names: NA

Gene position: 544662-543673 (Counterclockwise)

Preceding gene: 55980546

Following gene: 55980540

Centisome position: 29.45

GC content: 72.32

Gene sequence:

>990_bases
ATGGTGGTCGGCGTAGCGGGGTACTACGGGTTCAGGAACGCCGGGGACGAGGCGATCCTCGAGGCCATCGCCCGGGAGCT
CAAGGCCCGCGGCCACGAGGTGGTGGCCCTCTCCGGCGACCCCAAAAGGACCCGCGAGGACCACGGCCTCAGGGCCTACC
ACCGCCTGAACCCCCTGGCCCTCCTCCGGGCGGACCTCTGGCTCCTCGGAGGAGGGGGGCTTCTGCAGGACGCCACCAGC
GCCTTAAGCCTCACCTACTACCTCTCCGTGCTCCGCCTCGCCCGCCTCTTCCGCAAGCGGGTCGTGGTCTTCAACCAGTC
CCTGGGCCCCCTCTCCCCCTGGGGGGAGAGGCGGGTGCGAAAGGCCCTCCAGGGCGTGCCGGTGATCCTCAGGGACCAGG
ACTCCCTGGAGTACGCCCGGCGCCTGGGGATCCCCGCCGCCCTCGGGGCCGACCCCGCCCTCCTCCTCCCGCCGCCCCCC
GTGCCGCGGGAGGAGGACCTCGTCCTCGTCATCCCCCGGGCGGGGGTGCGGGAGGAGGCCCTCACGACCCTCTACGTGGC
CGCCAACCACCTGGTCCACGAGGGGAAGCAGGTCCTCGTCCTCCTCCTCCAGCCCGGCTACGACGACGAGGTGGCCGAGG
TCTTCCGCCTCCACCGCATAGAGCGCACCTCCGACCCCCGCCGCCTCCTCTACCTCGCGGCCCAGGCGGGGTACGTGATC
TCCATGCGCCTCCACGGCCTGATCCTGGCCGCGGCCGCGGGCACCCCCTTCGCCGCCCTCTCCTACGACCCCAAGGTGGC
CGCCTTCGCCAAGGAGACGGGGGCCTACTACCAGGAGCTCCCCGGGGAGCCCATCAAGCTCTACAAGGCCGCCCTTTACG
GCCGCTTCCCCGACTGGGAGAAGGTGGCCCGGCTGAAGGAGCGGGCGCGGCAGAGCTTTGACCTGGCGCTGGGGGAGGGC
GTCCCCATCAAAGGCTCCGGGCGCGGCTGA

Upstream 100 bases:

>100_bases
ACACCCCCCTCCCCATCTCCTTCTTCCGGGTGCTGAACGGCGCCCTCCTCGGCCTTTCCCTCGGGCTTGTCGGGGTTATC
CTGGTAAGGAGGCTTAGGGC

Downstream 100 bases:

>100_bases
GGCGGCCCGCAAGCCCCTCGGCGAAGGCCCTGAGGTCCTCCAGGGCCTCCTCCACGCTTTGGCGGAGCAGGAACTCCCCG
GGGGAGAGGCGCTTGAGGAG

Product: pyruvyl-transferase

Products: NA

Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Csab

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS
ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP
VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI
SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG
VPIKGSGRG

Sequences:

>Translated_329_residues
MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS
ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP
VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI
SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG
VPIKGSGRG
>Mature_329_residues
MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLALLRADLWLLGGGGLLQDATS
ALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVRKALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPP
VPREEDLVLVIPRAGVREEALTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI
SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWEKVARLKERARQSFDLALGEG
VPIKGSGRG

Specific function: Unknown

COG id: COG2327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36191; Mature: 36191

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLA
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCHHH
LLRADLWLLGGGGLLQDATSALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVR
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
KALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPPVPREEDLVLVIPRAGVREEA
HHHCCCCEEEECCHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHH
LTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI
HHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEE
SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWE
EEEHHEEEEEECCCCCEEEECCCCCHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCHH
KVARLKERARQSFDLALGEGVPIKGSGRG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVGVAGYYGFRNAGDEAILEAIARELKARGHEVVALSGDPKRTREDHGLRAYHRLNPLA
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCHHH
LLRADLWLLGGGGLLQDATSALSLTYYLSVLRLARLFRKRVVVFNQSLGPLSPWGERRVR
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
KALQGVPVILRDQDSLEYARRLGIPAALGADPALLLPPPPVPREEDLVLVIPRAGVREEA
HHHCCCCEEEECCHHHHHHHHCCCCHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHH
LTTLYVAANHLVHEGKQVLVLLLQPGYDDEVAEVFRLHRIERTSDPRRLLYLAAQAGYVI
HHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEE
SMRLHGLILAAAAGTPFAALSYDPKVAAFAKETGAYYQELPGEPIKLYKAALYGRFPDWE
EEEHHEEEEEECCCCCEEEECCCCCHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCHH
KVARLKERARQSFDLALGEGVPIKGSGRG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA