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The map label for this gene is 55980509

Identifier: 55980509

GI number: 55980509

Start: 502693

End: 503703

Strand: Reverse

Name: 55980509

Synonym: TTHA0540

Alternate gene names: NA

Gene position: 503703-502693 (Counterclockwise)

Preceding gene: 55980510

Following gene: 55980507

Centisome position: 27.23

GC content: 70.72

Gene sequence:

>1011_bases
ATGAAGACGCGGCACCTCGTCTACCTCGCCTTCGCCCTGCTCGGGCTGGGCCTCGCGGGGCTTCTGGAGGACTGGGGGCT
CCTTCCCCAAAGCCCCTCCCTCCTCTCCCTCAACCGGCTCTACCTGGCCCTGGCGGGCCTCCTCACCGGCCTCCTCTTGG
GGCCAAGGCTGGAGGGGGCGCTGGAAGCCCGCCTGAAGCGCCTCCGAAGCCTCCCCCCCGAGGTGGTCGTGGCCACCACC
CTGGGCTCCACCATAGGCCTCCTCCTCGCCGTCCTCCTCACCACCCTCCTCGCCCAGGTGCCGGGCTTCTCCCCTGTCCA
CAGCCTCCTCCTCGCCCTCGGGCTCGTGGCCCTCTTCGTCTACCTGGCTTTGGGCTACCGCGCCTACTTCCGGCTGCCCG
AGCCCAAGCCCGCCCCCCGGGGGGGGAAGGTGCTGGACACCAGCGTCCTGGTGGACGGCCGCGTGGCCGAGGTGGCGGCC
GTGGGGTTTCTGGAGGGGCCCCTGTGGGTGCCCCACTTCGTCCTGAAGGAGCTCCAGCACTTCGCCGACAGCCAAGACCC
CTTAAGGCGGGCCAAGGGGAGGCGGGGGCTGGAAACCCTGGAGCGCCTCAGGGAGGCCGCCCCCCTCGAGGTCCTGGAGA
CGACCCCCAAGGGGGAGTCCGTGGACGAGAAGCTCCTCTTCCTGGCCCGGGACCTCGAGGCCGCCCTGGTCACCAACGAC
CACGCCCTCCTGCAGATGGCCCGGATCTACGGGGTGAAGGCCCTCTCCATCCAGGCCCTGGCCCAGGCCCTAAGGCCCCA
GCTCCAGGTGGGGGACACCCTGAAGCTTCTCATCCTCAAGGAGGGGAAGGAGCCCCACCAGGGGGTGGGCTACCTGGAGG
ACGGCTCCATGGTGGTGGTGGACGGGGGGAGCCGCTACCGGGGGCAGGAGATTGAGGTGGTGGTCACCCAGGCCATCCAG
ACCCAGGTGGGCCGCCTCTTCTTCGCCCGCCCCGCCCAAGGGGCTCAGTAG

Upstream 100 bases:

>100_bases
TGGAGCGGAGGCTTAGGGAGGGGGAGCGGGCGGGGTTCGGCCGCTTCCTCCACCCGGGGAACCTTAAGCGCCTTCAGGAG
GCTGTGGAGGCGTACCTGGC

Downstream 100 bases:

>100_bases
GTGGTGGCCTCCTCGTCCTGGAGGTCCCCCTCCACCCGCGCGTTCTCCAGGTCCGCCCGGCGGAGGAGCTCCAGCCGGAT
CAGGGCCGAGGTGTACCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKTRHLVYLAFALLGLGLAGLLEDWGLLPQSPSLLSLNRLYLALAGLLTGLLLGPRLEGALEARLKRLRSLPPEVVVATT
LGSTIGLLLAVLLTTLLAQVPGFSPVHSLLLALGLVALFVYLALGYRAYFRLPEPKPAPRGGKVLDTSVLVDGRVAEVAA
VGFLEGPLWVPHFVLKELQHFADSQDPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTND
HALLQMARIYGVKALSIQALAQALRPQLQVGDTLKLLILKEGKEPHQGVGYLEDGSMVVVDGGSRYRGQEIEVVVTQAIQ
TQVGRLFFARPAQGAQ

Sequences:

>Translated_336_residues
MKTRHLVYLAFALLGLGLAGLLEDWGLLPQSPSLLSLNRLYLALAGLLTGLLLGPRLEGALEARLKRLRSLPPEVVVATT
LGSTIGLLLAVLLTTLLAQVPGFSPVHSLLLALGLVALFVYLALGYRAYFRLPEPKPAPRGGKVLDTSVLVDGRVAEVAA
VGFLEGPLWVPHFVLKELQHFADSQDPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTND
HALLQMARIYGVKALSIQALAQALRPQLQVGDTLKLLILKEGKEPHQGVGYLEDGSMVVVDGGSRYRGQEIEVVVTQAIQ
TQVGRLFFARPAQGAQ
>Mature_336_residues
MKTRHLVYLAFALLGLGLAGLLEDWGLLPQSPSLLSLNRLYLALAGLLTGLLLGPRLEGALEARLKRLRSLPPEVVVATT
LGSTIGLLLAVLLTTLLAQVPGFSPVHSLLLALGLVALFVYLALGYRAYFRLPEPKPAPRGGKVLDTSVLVDGRVAEVAA
VGFLEGPLWVPHFVLKELQHFADSQDPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTND
HALLQMARIYGVKALSIQALAQALRPQLQVGDTLKLLILKEGKEPHQGVGYLEDGSMVVVDGGSRYRGQEIEVVVTQAIQ
TQVGRLFFARPAQGAQ

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 36378; Mature: 36378

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRHLVYLAFALLGLGLAGLLEDWGLLPQSPSLLSLNRLYLALAGLLTGLLLGPRLEGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LEARLKRLRSLPPEVVVATTLGSTIGLLLAVLLTTLLAQVPGFSPVHSLLLALGLVALFV
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YLALGYRAYFRLPEPKPAPRGGKVLDTSVLVDGRVAEVAAVGFLEGPLWVPHFVLKELQH
HHHHHHHHEEECCCCCCCCCCCCEEEHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
FADSQDPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTND
HCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
HALLQMARIYGVKALSIQALAQALRPQLQVGDTLKLLILKEGKEPHQGVGYLEDGSMVVV
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCEEEE
DGGSRYRGQEIEVVVTQAIQTQVGRLFFARPAQGAQ
ECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MKTRHLVYLAFALLGLGLAGLLEDWGLLPQSPSLLSLNRLYLALAGLLTGLLLGPRLEGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LEARLKRLRSLPPEVVVATTLGSTIGLLLAVLLTTLLAQVPGFSPVHSLLLALGLVALFV
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
YLALGYRAYFRLPEPKPAPRGGKVLDTSVLVDGRVAEVAAVGFLEGPLWVPHFVLKELQH
HHHHHHHHEEECCCCCCCCCCCCEEEHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
FADSQDPLRRAKGRRGLETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTND
HCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
HALLQMARIYGVKALSIQALAQALRPQLQVGDTLKLLILKEGKEPHQGVGYLEDGSMVVV
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCEEEE
DGGSRYRGQEIEVVVTQAIQTQVGRLFFARPAQGAQ
ECCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]