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The map label for this gene is ftsY [H]

Identifier: 55980405

GI number: 55980405

Start: 409940

End: 410854

Strand: Reverse

Name: ftsY [H]

Synonym: TTHA0436

Alternate gene names: 55980405

Gene position: 410854-409940 (Counterclockwise)

Preceding gene: 55980406

Following gene: 55980404

Centisome position: 22.21

GC content: 71.04

Gene sequence:

>915_bases
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTTGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCGGAAGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAAAACGGCCTGGAGCAGGCC
AAGCGCTTTCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Upstream 100 bases:

>100_bases
TGGACCCCACCACCGGCCTCTTCGCCGAGGGCGGCTACACCTACGGCTTCGCCGACTTTCCTAAGGTCTTCCGCCTCGCC
TTCGGGGTAAGCTTCCGCTG

Downstream 100 bases:

>100_bases
GCGCCCGGGCGTGGGTTTCGCCAAAGGGGACGCCCGAACCAGGCTTTGGGGCATTAGCCCACGAGCAGCCGCCCAAGGAG
CCAGAGGTTGAGCCCGGTCA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Sequences:

>Translated_304_residues
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA
>Mature_303_residues
GLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDER
RATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPVI
QGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQAK
RFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=283, Percent_Identity=34.6289752650177, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI226371618, Length=251, Percent_Identity=35.4581673306773, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI23308697, Length=313, Percent_Identity=29.3929712460064, Blast_Score=114, Evalue=8e-26,
Organism=Homo sapiens, GI295424842, Length=313, Percent_Identity=29.3929712460064, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=39.2592592592593, Blast_Score=96, Evalue=5e-20,
Organism=Escherichia coli, GI1789874, Length=309, Percent_Identity=47.2491909385113, Blast_Score=234, Evalue=4e-63,
Organism=Escherichia coli, GI1788963, Length=312, Percent_Identity=33.0128205128205, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=288, Percent_Identity=31.9444444444444, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=260, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=271, Percent_Identity=32.8413284132841, Blast_Score=142, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=318, Percent_Identity=28.9308176100629, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=34.7368421052632, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24641198, Length=313, Percent_Identity=26.517571884984, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 32722; Mature: 32590

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
RRDLKEVVKEKLVQMLEPDERRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
KLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPVIQGPEGADPAALAFDAAKAR
HHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
RARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEA
HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHH
LLEA
HHCC
>Mature Secondary Structure 
GLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
RRDLKEVVKEKLVQMLEPDERRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
KLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPVIQGPEGADPAALAFDAAKAR
HHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
RARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEA
HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHH
LLEA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA