Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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Identifier: 55980377

GI number:

Start: 387447

End: 388373

Strand: Direct

Name: Not Available

Synonym: TTHA0408

Alternate gene names: NA

Gene position: NA

Preceding gene: 55980376

Following gene: 55980378

Centisome position: NA

GC content: NA

Gene sequence:

>927_bases
GTGGTGCGCTTTCGTAGGGAAGGGGTGCGTCTGGACCAGGCGGTGGCGGAGGCCCTCTCCGTGAGCCGGGCCAAGGCCCA
GGCCTGGATCCAGGCCGGGCGGGTCCGGGTGGGGGACCGGGTGGTCCTCAAGCCCGCCTACCGGCTCAAAGGGGAGGAGG
TGGCGGTGGAGCCCGTGGAGGAGGCTCCCATGGTCCTCCCCGAGGACCTGCCCATTCCCATCCTCTACGAGGACGAGGAC
GTCCTGGCCCTGAACAAGCCCCCGGGCCTCCTTACCCACCCCGCCCCCGGGGTCTACTCGGGCACGGTGGTGAACCTCCT
CCTCGCCCGCTACTACGGGCCCGTGGAGAAGGGGCCCCCCGAGCTCGTCCGCCCCGGGATCGTCCACCGCCTGGACAAGG
ACACGAGCGGCGTCCTGGTGGTGGCGAAGCACGGGGGGGTCCTCGAGGGCCTGGCCCGGGCCTTCCGCGACCGCCTGGTG
ATGAAGCGCTACCTGGCCATCACCGAGGGCCACCCCCGGGAGGGGGTCCTCATCGCCCCCATCGGGAGGCATCCCCGGGA
GCGGCACAAGATGCACGTGGGCGGCCTCGCCGCCCGTTACGCCGAGACCGAGTTCCAGGTCCTGGCCACCGCAGGCCCCT
ACGCCCTGGTGGAGGCGAGGCCCCATACGGGGCGCACCCACCAGATCCGGGTCCACCTCAAGTACCTCGGGGCCCCCATC
CTGGGGGACGAGCTCTACGGGAGAAAGAGCCCCCATATCGGGCGCCAGGCCCTCCACGCCTACGAGCTCCGCATCCCCCA
TCCCCGCACGGGCCGGATTTTGGAGCTTCTCGCCCCCGTGCCCCAGGACATGGCGGCGGCCTGGGAGGCCCTGGGGGGGA
GGTGGCCGGAGGAGGTGGTGCGGGAAGGGTATGCTGGGGCGCAATGA

Upstream 100 bases:

>100_bases
ACGCGCAGGAGGTCCGGGAAGGGGTCTTCCCCGGGGAGGAGCATAGTTTCTGAAAAACTCCGCTGAAAACCCGGCCCCTT
AAGGGGTAGAATGGGCTTTC

Downstream 100 bases:

>100_bases
GGTCCTTTCCAAAGGCTAAAGAGGCCTTCTCAGAGGGGGAAAAGGTCTCCTTTGGAGTTCACCGCCTCCACGTGGGGGAC
GCCCGGGAGGTGCTGGCCTC

Product: ribosomal large subunit pseudouridine synthase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>308_residues
MVRFRREGVRLDQAVAEALSVSRAKAQAWIQAGRVRVGDRVVLKPAYRLKGEEVAVEPVEEAPMVLPEDLPIPILYEDED
VLALNKPPGLLTHPAPGVYSGTVVNLLLARYYGPVEKGPPELVRPGIVHRLDKDTSGVLVVAKHGGVLEGLARAFRDRLV
MKRYLAITEGHPREGVLIAPIGRHPRERHKMHVGGLAARYAETEFQVLATAGPYALVEARPHTGRTHQIRVHLKYLGAPI
LGDELYGRKSPHIGRQALHAYELRIPHPRTGRILELLAPVPQDMAAAWEALGGRWPEEVVREGYAGAQ

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA