Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980373

Identifier: 55980373

GI number: 55980373

Start: 383192

End: 384565

Strand: Direct

Name: 55980373

Synonym: TTHA0404

Alternate gene names: NA

Gene position: 383192-384565 (Clockwise)

Preceding gene: 55980371

Following gene: 55980376

Centisome position: 20.72

GC content: 73.87

Gene sequence:

>1374_bases
ATGTGGTATCCTCTAGCGGCGATGAAGGGGGTCCTCGAGGCCCTGCACCAGGGGGACTACGACACCGCCATTGACCTCCT
CACCCGGAAGGCCCTCTTCGGCCGGGAGAGGGAGGCCAAGGAGGCCTGGCTCCTCCTCGCCGAGGTCTACGCCCTCTACG
GGGAGGAGGGGCTGGAGAAGGCCCACCACGCCCTGGAGGAGGCCTACGCCCTGGGAGGGCTGGAGTACGACCCCCTGTAC
CGGAGCCTCCTCGCCGAGCTCCTCGCCCTGGAGGGGCGGCCCGAGCGGGAGGTCCTTCCCCTCTTCCTCCCGAGCCGGGA
CCCCCGGGTCCGGTACCACCAGGCCCAGGCCCTCTTCTACCTGGGGAGGCTGGAGGAGGCCTTGGAGGCCCTCGAGGCGG
GGCTTCCCCCCCACCTGGCCTGGCGGGCCGAGGGGCTTAAGGGGCGGATCCTGGAGCGGCTTGGCCGCCACGGGGAGGCC
GCCTTGGCCTACGAGCGGGGGGCGGAGCTCGCCCTGGGCCTGGAGCGGTACTGGCTCCTCCTGGACGCCGCCGCCATGTG
GCTGGAGGCCGGGGAGGGGGAGCGGGCCCTTCTCGCCCTGAAGGAGGCGGAGGCGGCGGTGGGGGAGGAGGACCCGGAGG
ACGCCGCCACCCGCCACTACCTCCTCGCCCGGGCCCACCTCCTTTTGGGCAACCCGGGCCTCGCCCTGGAGGAGATCCGC
AAGGCCCTGGCCCTGGAGGAGGAGAGCGGCCACAAGGCCTACGGCACCCCCTTGGTGGAGGGGCAGGCCCTCCTCCAGCT
CGGGCGCTACGAGGAGGCCATGGCGAGCTTCCGGGAGGCCCTGGCCCGGGCGGACGCCGGGGAGCGCCCCCACGTCCTCC
ACGAGATGGGGGTGGCGGCCCTGGACCACGGGGCCTACCCCGAGGCCGAGGAGCACCTCCGGGCCCTGGTGCGGGAGGAG
GGCTACCCCTACCTGGCCCAAGCCTACGCCGATCTGGCCGAGGCCCTCTACCGCCAGGGGCGCTACCAGGAGGCGGAGGC
CGCCGCCCGGGAGGCCGTGGCCCGGGGGGCGGTGGCCGCGGGGGAGTTGGTCCTGGGCCACGTGGCCTACGACCTCCTCC
ACCTGGAGGAGGCCTTGGAACACTACCGCAAGGCGGCGGAAAGCGCCGAGGAGGGGAGCCGGGAGTGGGTGGGGGCCCAG
GAGATGGTGGTGGACACCCTGGCCCAGCTCGGCTACCGCTTTCCCGAGGAGATGGTGCGCCGGGGCCAGGCGGTGCTGCC
CTACCTCCACCCGGCGGACGAGTGGCACGCCGCCCTCACCGCCTACGTGGAGCGCGCCCAGGCCCTCTTGCGGGAGGGGA
AGCGCCTGAACTGA

Upstream 100 bases:

>100_bases
CCAACAGGACGAGAAGGAGCAGGTTGAAAGGGTTGAACCGCTGCGGCAAGGTCTACCTCCCTTGCCCTATGGTAGCGCCT
TGCCGGTGGGAAGACGGGGC

Downstream 100 bases:

>100_bases
GCGCTTCCCAGGGGGCGGGGTTAGCCCCTCCGCAGGGGCTCCAGGGCCTTTAGGACCTCCTGGCTCCTTAAGGGTTTGGG
CAGGTGGAGGAGCCTCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY
RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA
ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR
KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE
GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ
EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN

Sequences:

>Translated_457_residues
MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY
RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA
ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR
KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE
GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ
EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN
>Mature_457_residues
MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY
RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA
ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR
KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE
GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ
EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50850; Mature: 50850

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHHALEEAYALGGLEYDPLYRSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
LGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEAALAYERGAELALGLERYWLL
HHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
LDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAA
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LDHGAYPEAEEHLRALVREEGYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAA
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
GELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQEMVVDTLAQLGYRFPEEMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHH
RGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEK
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHHALEEAYALGGLEYDPLYRSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
LGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEAALAYERGAELALGLERYWLL
HHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
LDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAA
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LDHGAYPEAEEHLRALVREEGYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAA
HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
GELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQEMVVDTLAQLGYRFPEEMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHH
RGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA