| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980373
Identifier: 55980373
GI number: 55980373
Start: 383192
End: 384565
Strand: Direct
Name: 55980373
Synonym: TTHA0404
Alternate gene names: NA
Gene position: 383192-384565 (Clockwise)
Preceding gene: 55980371
Following gene: 55980376
Centisome position: 20.72
GC content: 73.87
Gene sequence:
>1374_bases ATGTGGTATCCTCTAGCGGCGATGAAGGGGGTCCTCGAGGCCCTGCACCAGGGGGACTACGACACCGCCATTGACCTCCT CACCCGGAAGGCCCTCTTCGGCCGGGAGAGGGAGGCCAAGGAGGCCTGGCTCCTCCTCGCCGAGGTCTACGCCCTCTACG GGGAGGAGGGGCTGGAGAAGGCCCACCACGCCCTGGAGGAGGCCTACGCCCTGGGAGGGCTGGAGTACGACCCCCTGTAC CGGAGCCTCCTCGCCGAGCTCCTCGCCCTGGAGGGGCGGCCCGAGCGGGAGGTCCTTCCCCTCTTCCTCCCGAGCCGGGA CCCCCGGGTCCGGTACCACCAGGCCCAGGCCCTCTTCTACCTGGGGAGGCTGGAGGAGGCCTTGGAGGCCCTCGAGGCGG GGCTTCCCCCCCACCTGGCCTGGCGGGCCGAGGGGCTTAAGGGGCGGATCCTGGAGCGGCTTGGCCGCCACGGGGAGGCC GCCTTGGCCTACGAGCGGGGGGCGGAGCTCGCCCTGGGCCTGGAGCGGTACTGGCTCCTCCTGGACGCCGCCGCCATGTG GCTGGAGGCCGGGGAGGGGGAGCGGGCCCTTCTCGCCCTGAAGGAGGCGGAGGCGGCGGTGGGGGAGGAGGACCCGGAGG ACGCCGCCACCCGCCACTACCTCCTCGCCCGGGCCCACCTCCTTTTGGGCAACCCGGGCCTCGCCCTGGAGGAGATCCGC AAGGCCCTGGCCCTGGAGGAGGAGAGCGGCCACAAGGCCTACGGCACCCCCTTGGTGGAGGGGCAGGCCCTCCTCCAGCT CGGGCGCTACGAGGAGGCCATGGCGAGCTTCCGGGAGGCCCTGGCCCGGGCGGACGCCGGGGAGCGCCCCCACGTCCTCC ACGAGATGGGGGTGGCGGCCCTGGACCACGGGGCCTACCCCGAGGCCGAGGAGCACCTCCGGGCCCTGGTGCGGGAGGAG GGCTACCCCTACCTGGCCCAAGCCTACGCCGATCTGGCCGAGGCCCTCTACCGCCAGGGGCGCTACCAGGAGGCGGAGGC CGCCGCCCGGGAGGCCGTGGCCCGGGGGGCGGTGGCCGCGGGGGAGTTGGTCCTGGGCCACGTGGCCTACGACCTCCTCC ACCTGGAGGAGGCCTTGGAACACTACCGCAAGGCGGCGGAAAGCGCCGAGGAGGGGAGCCGGGAGTGGGTGGGGGCCCAG GAGATGGTGGTGGACACCCTGGCCCAGCTCGGCTACCGCTTTCCCGAGGAGATGGTGCGCCGGGGCCAGGCGGTGCTGCC CTACCTCCACCCGGCGGACGAGTGGCACGCCGCCCTCACCGCCTACGTGGAGCGCGCCCAGGCCCTCTTGCGGGAGGGGA AGCGCCTGAACTGA
Upstream 100 bases:
>100_bases CCAACAGGACGAGAAGGAGCAGGTTGAAAGGGTTGAACCGCTGCGGCAAGGTCTACCTCCCTTGCCCTATGGTAGCGCCT TGCCGGTGGGAAGACGGGGC
Downstream 100 bases:
>100_bases GCGCTTCCCAGGGGGCGGGGTTAGCCCCTCCGCAGGGGCTCCAGGGCCTTTAGGACCTCCTGGCTCCTTAAGGGTTTGGG CAGGTGGAGGAGCCTCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN
Sequences:
>Translated_457_residues MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN >Mature_457_residues MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEKAHHALEEAYALGGLEYDPLY RSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFYLGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEA ALAYERGAELALGLERYWLLLDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAALDHGAYPEAEEHLRALVREE GYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAAGELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQ EMVVDTLAQLGYRFPEEMVRRGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50850; Mature: 50850
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AHHALEEAYALGGLEYDPLYRSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH LGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEAALAYERGAELALGLERYWLL HHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH LDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAA HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LDHGAYPEAEEHLRALVREEGYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAA HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH GELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQEMVVDTLAQLGYRFPEEMVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHH RGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MWYPLAAMKGVLEALHQGDYDTAIDLLTRKALFGREREAKEAWLLLAEVYALYGEEGLEK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AHHALEEAYALGGLEYDPLYRSLLAELLALEGRPEREVLPLFLPSRDPRVRYHQAQALFY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH LGRLEEALEALEAGLPPHLAWRAEGLKGRILERLGRHGEAALAYERGAELALGLERYWLL HHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHH LDAAAMWLEAGEGERALLALKEAEAAVGEEDPEDAATRHYLLARAHLLLGNPGLALEEIR HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH KALALEEESGHKAYGTPLVEGQALLQLGRYEEAMASFREALARADAGERPHVLHEMGVAA HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LDHGAYPEAEEHLRALVREEGYPYLAQAYADLAEALYRQGRYQEAEAAAREAVARGAVAA HCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH GELVLGHVAYDLLHLEEALEHYRKAAESAEEGSREWVGAQEMVVDTLAQLGYRFPEEMVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHH RGQAVLPYLHPADEWHAALTAYVERAQALLREGKRLN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA