| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980237
Identifier: 55980237
GI number: 55980237
Start: 255137
End: 255640
Strand: Reverse
Name: 55980237
Synonym: TTHA0268
Alternate gene names: NA
Gene position: 255640-255137 (Counterclockwise)
Preceding gene: 55980238
Following gene: 55980236
Centisome position: 13.82
GC content: 70.83
Gene sequence:
>504_bases ATGGGACGCGCGGTCAAAGTGGCCCTTGCGGTCCTGGCCCTGGGGCTTTCGGCCTTCGCCCTTTACCTCTGGGCCTCCCC CTACCTCTTCCTCCGCGCCCTCCAGGGGGCGGTCCTCGAGGGGGACCGGGCGCGGCTGGAAAGGCTCGTGGACTTCCCCC GGGTCCGGGAGGGGCTCAAGGCCCAGGTCCAGGCCAGGCTCCTCCGGGAGATGGGACAGGAGGTGGCGCAAAACCCCCTG GCCGGCCTCGCCTACCTCTTCGTGGCCGGGATGGTGGACCCCCTGGTGGACGCCCTCGTCTCCCCCGAGGGGCTTGCCGC CTTGGGCACGGGGATGGGCCCCGGGGAGGCGCCCAAGGAGGCGGTGAAGGGCTGGAGGCTCGCCTACCAGGACTTCCGCA CCGCCTACGTCTACCACCCCGAGGACCCCAGAAGCCGCCTCTACCTGGAACGGCAGGGGCTTTTCGGGTGGAAGGTGGTG CGGATGGAGCTCCCCTTGGAGTAG
Upstream 100 bases:
>100_bases GTGGTGGCCTTCTTCTTCGGGGAGGCCCTCTGGGGGGCGTACCTGCGCCTTCTGGGCGTTTGAACCGGGAAGGGGAGTCT TCTTTTGCTATAAAGCGTTC
Downstream 100 bases:
>100_bases TATCCTGGCCCCCGTGGAACTCCTAGACGTCCTGGCGAGAAGGCGGAGCGTACGCCGCTTCAAGCCCCTTCCCCTTCCCG AGGAGGACCTGGAAAAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGRAVKVALAVLALGLSAFALYLWASPYLFLRALQGAVLEGDRARLERLVDFPRVREGLKAQVQARLLREMGQEVAQNPL AGLAYLFVAGMVDPLVDALVSPEGLAALGTGMGPGEAPKEAVKGWRLAYQDFRTAYVYHPEDPRSRLYLERQGLFGWKVV RMELPLE
Sequences:
>Translated_167_residues MGRAVKVALAVLALGLSAFALYLWASPYLFLRALQGAVLEGDRARLERLVDFPRVREGLKAQVQARLLREMGQEVAQNPL AGLAYLFVAGMVDPLVDALVSPEGLAALGTGMGPGEAPKEAVKGWRLAYQDFRTAYVYHPEDPRSRLYLERQGLFGWKVV RMELPLE >Mature_166_residues GRAVKVALAVLALGLSAFALYLWASPYLFLRALQGAVLEGDRARLERLVDFPRVREGLKAQVQARLLREMGQEVAQNPLA GLAYLFVAGMVDPLVDALVSPEGLAALGTGMGPGEAPKEAVKGWRLAYQDFRTAYVYHPEDPRSRLYLERQGLFGWKVVR MELPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18454; Mature: 18323
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAVKVALAVLALGLSAFALYLWASPYLFLRALQGAVLEGDRARLERLVDFPRVREGLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH AQVQARLLREMGQEVAQNPLAGLAYLFVAGMVDPLVDALVSPEGLAALGTGMGPGEAPKE HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHH AVKGWRLAYQDFRTAYVYHPEDPRSRLYLERQGLFGWKVVRMELPLE HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCC >Mature Secondary Structure GRAVKVALAVLALGLSAFALYLWASPYLFLRALQGAVLEGDRARLERLVDFPRVREGLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH AQVQARLLREMGQEVAQNPLAGLAYLFVAGMVDPLVDALVSPEGLAALGTGMGPGEAPKE HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHH AVKGWRLAYQDFRTAYVYHPEDPRSRLYLERQGLFGWKVVRMELPLE HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA