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The map label for this gene is 55980137

Identifier: 55980137

GI number: 55980137

Start: 163226

End: 163720

Strand: Direct

Name: 55980137

Synonym: TTHA0168

Alternate gene names: NA

Gene position: 163226-163720 (Clockwise)

Preceding gene: 55980136

Following gene: 55980141

Centisome position: 8.82

GC content: 69.7

Gene sequence:

>495_bases
GTGAAAGAGTTCAGGCCTGGGGACAAGGTGGTCTTGCCCCCCTACGGGGTCGGCGTGGTGGCGGGCATCGCCCAGCGGAG
CGTAAGCGGGGTGAGCCGGGCCTACTACCAGGTGGACTTCCCCGGTTCCCGCTCCAAGGCCTACGTGCCGGTGGAGGCGC
CCCACAGCGTGGGCCTAAGGAAGGCCCTGGCCCCGGAAGAGGTCCCCGTGATCCTGGACCTGCTCAAGAACGGGCGGATG
CCCCTCCCCAAGCAGTGGGCCGCCCGGCACCGCAAGACCAGCGAGATCCTGGCGGACGGGAACCCCTACCGCATCGCCCA
GATGGCGGGGCAGCTCCGGGCCTGGGAGGTGGAGCGGGGCCTTCCCGACCTGGACCGGCAGGCCCTGAGGCGGGCCATCC
ACCTCCTGGCCGAGGAGGTGGCCCAAAGCCTAGAGATCACCGTCCAGGAGGCGAAGCGCCTCTTTGAGGAAGCCTGGGGC
GAGGAGCTGAACTGA

Upstream 100 bases:

>100_bases
CCACGGCCGCGGTCATCGCGGCGATGGGGTGCACCCCTTCCTTGGAGGTGGAAGCCTATTTGGAGCATCTTATGGAGGTG
CTCCGGAAAGGAGTAGAGCC

Downstream 100 bases:

>100_bases
GCGCCCGCTTGCGGCCTCCCCGGCCCGGCCGGGGGGGCCGCCTTTTTCGGGGGGCTTCCCGGGCGAAGGCGACGGGGAGG
GTGATCCGGTTTCCTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator CarD Family; Transcriptional Regulator; Transcription Factor; Transcriptional Regulator Card Family; Transcription Factor CarD; CarD-Like Protein; Transcriptional Regulatory Protein; CarD Transcriptional Regulator; CarD-Like Transcriptional Regulator; Transcriptional Regulator CarD

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRM
PLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWG
EELN

Sequences:

>Translated_164_residues
MKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRM
PLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWG
EELN
>Mature_164_residues
MKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRM
PLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWG
EELN

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18290; Mature: 18290

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLR
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHHHHHH
KALAPEEVPVILDLLKNGRMPLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERG
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
LPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWGEELN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLR
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHHHHHH
KALAPEEVPVILDLLKNGRMPLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERG
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
LPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEEAWGEELN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA