| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is regX3 [H]
Identifier: 55980114
GI number: 55980114
Start: 141373
End: 142044
Strand: Reverse
Name: regX3 [H]
Synonym: TTHA0145
Alternate gene names: 55980114
Gene position: 142044-141373 (Counterclockwise)
Preceding gene: 55980115
Following gene: 55980113
Centisome position: 7.68
GC content: 74.26
Gene sequence:
>672_bases GTGGCCACCCTGCTTCTGGTGGAGGACGAGCCCAGCCTGCGCCTGGGGTTGCGGCTGGCCCTCGAGGGGGCGGGGCACCG GGTTTTGGAGGCGGCCACCGCGCAGGAGGCCTGGCCCCTCCTGCGGGAGGCGGAGCTCGTGGTCCTGGACTGGATGCTCC CCGACGAGCCCGGGGTGCGCCTCCTGGACCGGATGCGCCAGGGCCCCTACGAGTCCCTCCCCGTCCTGATGCTCACGGCC CGGGCCGGGGTGCGGGACCGGGTGGAGGGGCTTTCCCGCGGGGCCGACGACTACCTGGTGAAGCCCTTCGCCGTGGAGGA GCTTCTGGCCCGCCTCGAGGCCCTCTTGCGCCGGGCGGGGAAGCGCAAGGTGCTGAGGCGGGGCCCCCTCCTCCTGGACC TGGAGCGGATGGAGGCCCGCCTGGAAGGCAACCCCCTCCCCCTCACCCGGCGGGAGTTTGCCCTCCTCGCCTACCTGGCG GAGCGGCCGGGCCGGGTCTGCACCCGGGAAGAGCTCCTGGAGGCGGTCTGGGGCCCGGACTACCTCGGCACCCCCAGGAC CGTGGACCAGCACGTCCTCCAGCTCAGGGAGAAGCTCGGGGAGGACCCCAAGGCCCCCCGCTTCCTGGAGACGGTGCGGG GCGTGGGGTACCGCTTCCGGGAGGAGGCGTGA
Upstream 100 bases:
>100_bases GGGTGCGGGAACTGCTCTGACCCGGGCCAAAGCCGGCCTTTCCGGGGCCCAGAAGAAGCGCCTGACACTCCCCTGACCCG GCCCCCGCTAGACTGGGGGT
Downstream 100 bases:
>100_bases GCCCCGAGGCCTGGACCCTTCCTTGGGAGGAGGCCCGGGAGGGGCTCGTTGTGCACCGGGACAGGCAGGTGGTCTACCTC AACCCCGCGGCGGCGGAGCT
Product: phosphate regulon transcriptional regulatory protein PhoB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTA RAGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAGKRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLA ERPGRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA
Sequences:
>Translated_223_residues MATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTA RAGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAGKRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLA ERPGRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA >Mature_222_residues ATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVRLLDRMRQGPYESLPVLMLTAR AGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAGKRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAE RPGRVCTREELLEAVWGPDYLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=38.6666666666667, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=39.6396396396396, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=42.2018348623853, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=37.10407239819, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=35.8407079646018, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=37.8854625550661, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=40.625, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=36.986301369863, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=35.1598173515982, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=37.8854625550661, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=37.719298245614, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=31.8777292576419, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=30.8695652173913, Blast_Score=90, Evalue=9e-20, Organism=Escherichia coli, GI145693140, Length=241, Percent_Identity=30.7053941908714, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25316; Mature: 25185
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVR CCEEEEEECCCCCEEHHEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHH LLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAG HHHHHHCCCCCCCCHHHEEHHCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHH KRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERPGRVCTREELLEAVWGPD HHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC YLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHCCCC >Mature Secondary Structure ATLLLVEDEPSLRLGLRLALEGAGHRVLEAATAQEAWPLLREAELVVLDWMLPDEPGVR CEEEEEECCCCCEEHHEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHH LLDRMRQGPYESLPVLMLTARAGVRDRVEGLSRGADDYLVKPFAVEELLARLEALLRRAG HHHHHHCCCCCCCCHHHEEHHCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHH KRKVLRRGPLLLDLERMEARLEGNPLPLTRREFALLAYLAERPGRVCTREELLEAVWGPD HHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC YLGTPRTVDQHVLQLREKLGEDPKAPRFLETVRGVGYRFREEA CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA