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The map label for this gene is dcd [H]

Identifier: 55980099

GI number: 55980099

Start: 128065

End: 128610

Strand: Reverse

Name: dcd [H]

Synonym: TTHA0130

Alternate gene names: 55980099

Gene position: 128610-128065 (Counterclockwise)

Preceding gene: 55980101

Following gene: 55980098

Centisome position: 6.95

GC content: 64.1

Gene sequence:

>546_bases
ATGGTGAAGCCGGACTGGTGGATCCGGGAGATGGCGCGAAAGGGCATGATTGAGCCCTTTGAGGAAAGGCTCGTGCGGGA
GGGGGTCATCAGCTACGGGCTTTCCTCCTTCGGGTACGACCTCCGGGCCGCCCCCGAGTGGAAGATCTTCACCAACGTCT
TCTCCAGCCTGGTGGACCCCAAGAACTTTGACCCCAAGAGCTTCGTGGAGTACGAGGGGGAGGAGGTGGTGATCCCCCCA
AACTCCTTCGCCCTCACCCGGAGCCTGGAGTACATCCGCATGCCCGACAACGTGATCGCCATCGCCCTGGGCAAGAGCAC
CTACGCCCGGTGCGGCATCGTGGTGAACGTGACGCCTCTGGAGCCCGGCTGGGAAGGCCACGTCACCCTGGAGATCTCCA
ACACCACTCCCCTTCCCGCCAAGGTCTACGCAGGCGAAGGCATCGTCCAGCTCCTCTTCCTGGAGGGCCCCCGCCCCGAG
GTCACCTACCGGGACCGCAAAGGGAAGTACCAGGGGCAGAAGGGGATCACCCTCCCCCGGGTTTAG

Upstream 100 bases:

>100_bases
CCAGGCCCGCTCCCACGTCCTGGGCGCCGCAGGCGGCGAGGAGGAGGGCCAGAGGCCAGAGCTTCCGCATAGGGCCAGTC
TAGCGGGTATAGTTGAGGGC

Downstream 100 bases:

>100_bases
GCCATGATCCCCGAGGGCACCCGCTTCCTTTTGCCCCCCGAGGCCCGGCTCAAGGCCGAGGTGGTGGGGAAGCTCCAGCA
CCTCTTCCGGCGCCACGGCT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVKPDWWIREMARKGMIEPFEERLVREGVISYGLSSFGYDLRAAPEWKIFTNVFSSLVDPKNFDPKSFVEYEGEEVVIPP
NSFALTRSLEYIRMPDNVIAIALGKSTYARCGIVVNVTPLEPGWEGHVTLEISNTTPLPAKVYAGEGIVQLLFLEGPRPE
VTYRDRKGKYQGQKGITLPRV

Sequences:

>Translated_181_residues
MVKPDWWIREMARKGMIEPFEERLVREGVISYGLSSFGYDLRAAPEWKIFTNVFSSLVDPKNFDPKSFVEYEGEEVVIPP
NSFALTRSLEYIRMPDNVIAIALGKSTYARCGIVVNVTPLEPGWEGHVTLEISNTTPLPAKVYAGEGIVQLLFLEGPRPE
VTYRDRKGKYQGQKGITLPRV
>Mature_181_residues
MVKPDWWIREMARKGMIEPFEERLVREGVISYGLSSFGYDLRAAPEWKIFTNVFSSLVDPKNFDPKSFVEYEGEEVVIPP
NSFALTRSLEYIRMPDNVIAIALGKSTYARCGIVVNVTPLEPGWEGHVTLEISNTTPLPAKVYAGEGIVQLLFLEGPRPE
VTYRDRKGKYQGQKGITLPRV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=157, Percent_Identity=31.2101910828025, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20482; Mature: 20482

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPDWWIREMARKGMIEPFEERLVREGVISYGLSSFGYDLRAAPEWKIFTNVFSSLVDP
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCC
KNFDPKSFVEYEGEEVVIPPNSFALTRSLEYIRMPDNVIAIALGKSTYARCGIVVNVTPL
CCCCCCHHHEECCCEEEECCCCEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEC
EPGWEGHVTLEISNTTPLPAKVYAGEGIVQLLFLEGPRPEVTYRDRKGKYQGQKGITLPR
CCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCC
V
C
>Mature Secondary Structure
MVKPDWWIREMARKGMIEPFEERLVREGVISYGLSSFGYDLRAAPEWKIFTNVFSSLVDP
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCC
KNFDPKSFVEYEGEEVVIPPNSFALTRSLEYIRMPDNVIAIALGKSTYARCGIVVNVTPL
CCCCCCHHHEECCCEEEECCCCEEEECCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEC
EPGWEGHVTLEISNTTPLPAKVYAGEGIVQLLFLEGPRPEVTYRDRKGKYQGQKGITLPR
CCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA